PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG048720.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 531aa MW: 58444.6 Da PI: 4.7799

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG048720.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	113.7	1.2e-35	48	140	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d++++ ++sw +nsf+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll TRIDC4AG048720.7 48 FLMKTYDMVDDPATDAVVSWGPANNSFIVWNTPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEGFLRGQKHLL 131 9******************999*************************************999.........************ PP XXXXXXXXX CS HSF_DNA-bind 95 ekikrkkse 103 ++i+r+k + TRIDC4AG048720.7 132 KTINRRKPS 140 ****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 531 aa Download sequence
GRGRTDRGTA MDGGVAAAVA AAAAASTVTT AVAPPGAAGA GAGAPPPFLM KTYDMVDDPA 60 TDAVVSWGPA NNSFIVWNTP EFARDLLPKY FKHNNFSSFV RQLNTYGFRK VDPDKWEFAN 120 EGFLRGQKHL LKTINRRKPS HANNQVQVQQ QQPQQQQQQQ QPQLQNAPMP SCVEVGKFGM 180 EEEIEMLKRD KNVLMQELVR LRQQQQTTDH QLQTLGKRLH GMEQRQQQMM SFLAKAMQSP 240 GFLAQFVQQN ENSKRRIVAA NKKRRLPKQD DGLNSESALL DGQIIKYQPM INEAAKAMLR 300 KILQQDTSPH RFESMANSDN LLLENCMPSA QTFDSSSSTR NSAVTLAEVP GNSGMPYMPT 360 SSGLSAICSS SSPPEMQRPV LDTNSSTQLP NMSAVPSVPK AMTPGLSDIS IPGFPDLHDL 420 ITEDAINIPV ENFTMPGPEC IFPLPDEGSD DSVPMDPIDT DETDDTQKLP GIIDSFWEQF 480 LCASPLSIDN DEVDSGLLDT REAQEENGWT RTENLANLTE QMGLLSSNHR G

Sequence ? help Back to Top

Protein Sequence Length: 531 aa Download sequence

GRGRTDRGTA MDGGVAAAVA AAAAASTVTT AVAPPGAAGA GAGAPPPFLM KTYDMVDDPA  60
TDAVVSWGPA NNSFIVWNTP EFARDLLPKY FKHNNFSSFV RQLNTYGFRK VDPDKWEFAN  120
EGFLRGQKHL LKTINRRKPS HANNQVQVQQ QQPQQQQQQQ QPQLQNAPMP SCVEVGKFGM  180
EEEIEMLKRD KNVLMQELVR LRQQQQTTDH QLQTLGKRLH GMEQRQQQMM SFLAKAMQSP  240
GFLAQFVQQN ENSKRRIVAA NKKRRLPKQD DGLNSESALL DGQIIKYQPM INEAAKAMLR  300
KILQQDTSPH RFESMANSDN LLLENCMPSA QTFDSSSSTR NSAVTLAEVP GNSGMPYMPT  360
SSGLSAICSS SSPPEMQRPV LDTNSSTQLP NMSAVPSVPK AMTPGLSDIS IPGFPDLHDL  420
ITEDAINIPV ENFTMPGPEC IFPLPDEGSD DSVPMDPIDT DETDDTQKLP GIIDSFWEQF  480
LCASPLSIDN DEVDSGLLDT REAQEENGWT RTENLANLTE QMGLLSSNHR G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-120	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG048720.7