PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG048720.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 481aa MW: 54026.6 Da PI: 4.7143

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG048720.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	108.1	6.8e-34	1	90	5	103
HHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXX CS HSF_DNA-bind 5 klyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkelleki 97 k+y++++d++++ ++sw +nsf+v+++ efa+++LpkyFkh+nf+SFvRQLn+YgF+kv+ ++ weF+++ F +g+k+ll++i TRIDC4AG048720.2 1 KTYDMVDDPATDAVVSWGPANNSFIVWNTPEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDK---------WEFANEGFLRGQKHLLKTI 84 89**************999*************************************999.........*************** PP XXXXXX CS HSF_DNA-bind 98 krkkse 103 +r+k + TRIDC4AG048720.2 85 NRRKPS 90 *975 PP

Sequence ? help Back to Top
Protein Sequence Length: 481 aa Download sequence
KTYDMVDDPA TDAVVSWGPA NNSFIVWNTP EFARDLLPKY FKHNNFSSFV RQLNTYGFRK 60 VDPDKWEFAN EGFLRGQKHL LKTINRRKPS HANNQVQVQQ QQPQQQQQQQ QPQLQNAPMP 120 SCVEVGKFGM EEEIEMLKRD KNVLMQELVR LRQQQQTTDH QLQTLGKRLH GMEQRQQQMM 180 SFLAKAMQSP GFLAQFVQQN ENSKRRIVAA NKKRRLPKQD DGLNSESALL DGQIIKYQPM 240 INEAAKAMLR KILQQDTSPH RFESMANSDN LLLENCMPSA QTFDSSSSTR NSAVTLAEVP 300 GNSGMPYMPT SSGLSAICSS SSPPEMQRPV LDTNSSTQLP NMSAVPSVPK AMTPGLSDIS 360 IPGFPDLHDL ITEDAINIPV ENFTMPGPEC IFPLPDEGSD DSVPMDPIDT DETDDTQKLP 420 GIIDSFWEQF LCASPLSIDN DEVDSGLLDT REAQEENGWT RTENLANLTE QMGLLSSNHR 480 G

Sequence ? help Back to Top

Protein Sequence Length: 481 aa Download sequence

KTYDMVDDPA TDAVVSWGPA NNSFIVWNTP EFARDLLPKY FKHNNFSSFV RQLNTYGFRK  60
VDPDKWEFAN EGFLRGQKHL LKTINRRKPS HANNQVQVQQ QQPQQQQQQQ QPQLQNAPMP  120
SCVEVGKFGM EEEIEMLKRD KNVLMQELVR LRQQQQTTDH QLQTLGKRLH GMEQRQQQMM  180
SFLAKAMQSP GFLAQFVQQN ENSKRRIVAA NKKRRLPKQD DGLNSESALL DGQIIKYQPM  240
INEAAKAMLR KILQQDTSPH RFESMANSDN LLLENCMPSA QTFDSSSSTR NSAVTLAEVP  300
GNSGMPYMPT SSGLSAICSS SSPPEMQRPV LDTNSSTQLP NMSAVPSVPK AMTPGLSDIS  360
IPGFPDLHDL ITEDAINIPV ENFTMPGPEC IFPLPDEGSD DSVPMDPIDT DETDDTQKLP  420
GIIDSFWEQF LCASPLSIDN DEVDSGLLDT REAQEENGWT RTENLANLTE QMGLLSSNHR  480
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-118	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG048720.2