PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG047340.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 332aa    MW: 36432.2 Da    PI: 4.9592
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG047340.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.45.4e-05526223
                      EETTTTEEESSHHHHHHHHHHT CS
           zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                      kC +C++ F ++  L+rH r+H
  TRIDC4AG047340.4  5 KCAKCPREFCSSVALRRHTRVH 26
                      7*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MQLTKCAKCP REFCSSVALR RHTRVHRRAL KIDKDFPKNR DHLAAFWDKL TVDQAQAILS  60
LEGVAIEETS ALFILTSLSS WMCKPGYASL PLPYARAGNE LLDLIQTAAS RLPISSNELF  120
IMLDEASENT FLCTNAADAA FVQKFLFDGE VEKVATELKN VVACTSYILE QKLVEAWSAD  180
KAAEALRCQK LLVEEEDAAQ KRQAEIMERK RMKKLRQKEQ RLKDLKDEGT MVQLPEVVDG  240
ATSSPGIQSL EAVSGPGLHE QEDPQHLQLS APVPSDDNGC NGEDANCGSG QEIDTAAVFR  300
EQAMATSNLD RAENLPPNSS VSGSSATASK HP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1208215ERKRMKKL
2213223KKLRQKEQRLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25610.14e-74C2H2 family protein