PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG045860.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 911aa MW: 100643 Da PI: 6.7165

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG045860.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	97	2.1e-30	72	180	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...................tekerrtraetrtgCkaklkvkkekdgk 75 fYn YA++vGFs+r+s +++s+r+g+i++r+fvC keg+r+ + k+ + +rrtra+tr+gCka+++vkk++ gk TRIDC4AG045860.2 72 FYNLYAHRVGFSTRISVMHRSRRDGSIMSRQFVCAKEGFRTYRGKHeqaaalasspgapagaddgGRGARRTRAVTRVGCKAMIRVKKQDGGK 164 *****************************************9999************998999******************** PP FAR1 76 wevtkleleHnHelap 91 w +tkle+ HnH+l+p TRIDC4AG045860.2 165 WAITKLETAHNHPLVP 180 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 911 aa Download sequence
MERVAAGSSE QGTPDSEMGD GDNDSVGYGT EMELDASAPA PASAYPARPS VHDGVDPFEG 60 MEFDDEEDAW TFYNLYAHRV GFSTRISVMH RSRRDGSIMS RQFVCAKEGF RTYRGKHEQA 120 AALASSPGAP AGADDGGRGA RRTRAVTRVG CKAMIRVKKQ DGGKWAITKL ETAHNHPLVP 180 QNQAHCLRPH KPLSECGKQR SSSSYGVRRN GGMFLAIEPA PPPPPPTPPV PQTGIIPQPA 240 VVPHYIGDGI GNATRVILDY VKRMQAEDPA FFYAMQFVEG HPVGNVFWSD ARARTAYKDF 300 GDAVFLDDHC KRSKYELPLV TFTGVNHHCQ PVLFGCAVIR DNSEASFAWL FETLLLAMSG 360 QHPVSLTIEY DGAIQSAVHK VLPHTRHRFC RWHILNEAQC KLSDFLNAFP SLYDDLVNCI 420 NMSDTIDEFE ANWEALISKV GSGHNEWLDS MYNCRQQWVP VYLRDTFFGD EPSRQGCMSR 480 SSFFESHITA KTNSQSFIQH YEKALDSCYE REVKEEFETK YSLPDIKTPS PIEKQGADLY 540 TRTLFLRFQQ ELIGASVSTL EVAEQDGKAC TYKVTTSQGS EKPRMVQFNS SECSAKCTCQ 600 MFECLGIVCR HILTVFGAQG VSALPSQYIM KRWTKNATDR SSDKKPDEVI RVKELKEEQR 660 STVEDGEQSQ TWRYNSLCRE ALRYAEEGAS SAEVYIVAMQ ALQEAANKVN MAKRGIGQVA 720 APLAVMPITA QLPECSGKIQ DSFGQQKKRK RNSNNSRENS TPDQFMHMQQ PSNYLFVGPS 780 TSGGSQGPSQ LVAAIPVSSC AQHGQTSGAH NSTDGNMATA SVAVDKFHGF SDRDASTTAP 840 SSGNVVQAGE TKSSGVASQI NETSKKQIIS ALHFIYLELF NSSFKALTVI NLDDMCRVMN 900 CPKLMETREA A

Sequence ? help Back to Top

Protein Sequence Length: 911 aa Download sequence

MERVAAGSSE QGTPDSEMGD GDNDSVGYGT EMELDASAPA PASAYPARPS VHDGVDPFEG  60
MEFDDEEDAW TFYNLYAHRV GFSTRISVMH RSRRDGSIMS RQFVCAKEGF RTYRGKHEQA  120
AALASSPGAP AGADDGGRGA RRTRAVTRVG CKAMIRVKKQ DGGKWAITKL ETAHNHPLVP  180
QNQAHCLRPH KPLSECGKQR SSSSYGVRRN GGMFLAIEPA PPPPPPTPPV PQTGIIPQPA  240
VVPHYIGDGI GNATRVILDY VKRMQAEDPA FFYAMQFVEG HPVGNVFWSD ARARTAYKDF  300
GDAVFLDDHC KRSKYELPLV TFTGVNHHCQ PVLFGCAVIR DNSEASFAWL FETLLLAMSG  360
QHPVSLTIEY DGAIQSAVHK VLPHTRHRFC RWHILNEAQC KLSDFLNAFP SLYDDLVNCI  420
NMSDTIDEFE ANWEALISKV GSGHNEWLDS MYNCRQQWVP VYLRDTFFGD EPSRQGCMSR  480
SSFFESHITA KTNSQSFIQH YEKALDSCYE REVKEEFETK YSLPDIKTPS PIEKQGADLY  540
TRTLFLRFQQ ELIGASVSTL EVAEQDGKAC TYKVTTSQGS EKPRMVQFNS SECSAKCTCQ  600
MFECLGIVCR HILTVFGAQG VSALPSQYIM KRWTKNATDR SSDKKPDEVI RVKELKEEQR  660
STVEDGEQSQ TWRYNSLCRE ALRYAEEGAS SAEVYIVAMQ ALQEAANKVN MAKRGIGQVA  720
APLAVMPITA QLPECSGKIQ DSFGQQKKRK RNSNNSRENS TPDQFMHMQQ PSNYLFVGPS  780
TSGGSQGPSQ LVAAIPVSSC AQHGQTSGAH NSTDGNMATA SVAVDKFHGF SDRDASTTAP  840
SSGNVVQAGE TKSSGVASQI NETSKKQIIS ALHFIYLELF NSSFKALTVI NLDDMCRVMN  900
CPKLMETREA A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-162	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG045860.2