PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG044200.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GATA

Protein Properties

Length: 193aa MW: 21925.6 Da PI: 9.6959

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG044200.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	53.3	3.9e-17	118	154	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCgt++ Tp +Rrgp g++tLCnaCGl+++ kg+ TRIDC4AG044200.4 118 CQNCGTSEkmTPAMRRGPAGPRTLCNACGLMWANKGT 154 **********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 193 aa Download sequence
MRIYFRGQTF LQKGLLHSSG SAKNARGEIL ISKYAMLYAK KWHTGCSVGR GNLLEERIWR 60 GSPLLQAVIL SPRAQAKISC LENQSCLIFD HLIHFFCRYV IERERDDPFS PYHTCYRCQN 120 CGTSEKMTPA MRRGPAGPRT LCNACGLMWA NKGTLRSCSK AKVEAPMLAI EQVRFFIITI 180 EQAYRTLNLP CPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21175.1	1e-20	GATA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG044200.4