PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG043800.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 395aa    MW: 44062.3 Da    PI: 6.1106
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG043800.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.82.9e-11157241997
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                        +lk + + lp k +e+++++ +++ t++le ++   + v+   +k+++  +vl+ GW++ v+an+++e+D +vF  +g  +++l v+++
  TRIDC4AG043800.8 157 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDMIYGVEA--CKHGDDqIVLQYGWNNLVDANRIQENDLLVFITKG--TKRLEVRIL 241
                       45678999*******777666.5678****************..5555545*************************665..444577776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    
HLGSMISETI KLEAPNGIFL IGVCRKTGEL VLRAGWDKFV AMHHIKENYS FWFVYRGNST  60
FKVHIFNSNG HEKATSCSKP PSESFGGVPP AATCDHHVLN EQVPSVSGNV QTSTDSGYSM  120
LPGCHLTKAQ DEKVRELACT MRSQVPLYVA VMNKSNVNLK DCSVNLPLKL VEHFKEDTSK  180
ATIQLEAPND MIYGVEACKH GDDQIVLQYG WNNLVDANRI QENDLLVFIT KGTKRLEVRI  240
LGTSVHQRTS SCFDVGNISS TQEIREDSLE ITDPPPHTDY YVSSSDDDHI MEEGYYVSSS  300
DDDHIAEEDY VSSSDADHIV EEGTRKSGRR QKQAPSRYAK AQKVASTSSP SAAKSGYSAI  360
YTSAFSFYQF PNCFWLSYAY LMRVVQAFQD MKLTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.14e-08B3 family protein