PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG043800.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 466aa MW: 52141.4 Da PI: 6.6887

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG043800.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34.4	3.8e-11	228	312	9	97
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +lk + + lp k +e+++++ +++ t++le ++ + v+ +k+++ +vl+ GW++ v+an+++e+D +vF +g +++l v+++ TRIDC4AG043800.6 228 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDMIYGVEA--CKHGDDqIVLQYGWNNLVDANRIQENDLLVFITKG--TKRLEVRIL 312 45678999*****777666.5678************..5555545***********************665..444577776 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
RPQLLRPLSP EQPHPSPSSQ QGLPGRSARE SCTMWWRHYP RNHVGDDKTQ FVAVATGGFR 60 RSMCIPWEVA NHLGSMISET IKLEAPNGIF LIGVCRKTGE LVLRAGWDKF VAMHHIKENY 120 SFWFVYRGNS TFKVHIFNSN GHEKATSCSK PPSESFGGVP PAATCDHHVL NEQVPSVSGN 180 VQTSTDSGYS MLPGCHLTKA QDEKVRELAC TMRSQVPLYV AVMNKSNVNL KDCSVNLPLK 240 LVEHFKEDTS KATIQLEAPN DMIYGVEACK HGDDQIVLQY GWNNLVDANR IQENDLLVFI 300 TKGTKRLEVR ILGTSVHQRT SSCFDVGNIS STQEIREDSL EITDPPPHTD YYVSSSDDDH 360 IMEEGYYVSS SDDDHIAEED YVSSSDADHI VEEGTRKSGR RQKQAPSRYA KAQKVASTSS 420 PSAAKSGYSA IYTSAFSFYQ FPNCFWLSYA YLMRVVQAFQ DMKLTS

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

RPQLLRPLSP EQPHPSPSSQ QGLPGRSARE SCTMWWRHYP RNHVGDDKTQ FVAVATGGFR  60
RSMCIPWEVA NHLGSMISET IKLEAPNGIF LIGVCRKTGE LVLRAGWDKF VAMHHIKENY  120
SFWFVYRGNS TFKVHIFNSN GHEKATSCSK PPSESFGGVP PAATCDHHVL NEQVPSVSGN  180
VQTSTDSGYS MLPGCHLTKA QDEKVRELAC TMRSQVPLYV AVMNKSNVNL KDCSVNLPLK  240
LVEHFKEDTS KATIQLEAPN DMIYGVEACK HGDDQIVLQY GWNNLVDANR IQENDLLVFI  300
TKGTKRLEVR ILGTSVHQRT SSCFDVGNIS STQEIREDSL EITDPPPHTD YYVSSSDDDH  360
IMEEGYYVSS SDDDHIAEED YVSSSDADHI VEEGTRKSGR RQKQAPSRYA KAQKVASTSS  420
PSAAKSGYSA IYTSAFSFYQ FPNCFWLSYA YLMRVVQAFQ DMKLTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-11	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG043800.6