PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG043800.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 459aa MW: 51379.5 Da PI: 6.5958

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG043800.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34.5	3.8e-11	221	305	9	97
HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 +lk + + lp k +e+++++ +++ t++le ++ + v+ +k+++ +vl+ GW++ v+an+++e+D +vF +g +++l v+++ TRIDC4AG043800.5 221 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDMIYGVEA--CKHGDDqIVLQYGWNNLVDANRIQENDLLVFITKG--TKRLEVRIL 305 45678999*****777666.5678************..5555545***********************665..444577776 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
LRPLSPEQPH PSPSSQQGRS ARESCTMWWR HYPRNHVGDD KTQFVAVATG GFRRSMCIPW 60 EVANHLGSMI SETIKLEAPN GIFLIGVCRK TGELVLRAGW DKFVAMHHIK ENYSFWFVYR 120 GNSTFKVHIF NSNGHEKATS CSKPPSESFG GVPPAATCDH HVLNEQVPSV SGNVQTSTDS 180 GYSMLPGCHL TKAQDEKVRE LACTMRSQVP LYVAVMNKSN VNLKDCSVNL PLKLVEHFKE 240 DTSKATIQLE APNDMIYGVE ACKHGDDQIV LQYGWNNLVD ANRIQENDLL VFITKGTKRL 300 EVRILGTSVH QRTSSCFDVG NISSTQEIRE DSLEITDPPP HTDYYVSSSD DDHIMEEGYY 360 VSSSDDDHIA EEDYVSSSDA DHIVEEGTRK SGRRQKQAPS RYAKAQKVAS TSSPSAAKSG 420 YSAIYTSAFS FYQFPNCFWL SYAYLMRVVQ AFQDMKLTS

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

LRPLSPEQPH PSPSSQQGRS ARESCTMWWR HYPRNHVGDD KTQFVAVATG GFRRSMCIPW  60
EVANHLGSMI SETIKLEAPN GIFLIGVCRK TGELVLRAGW DKFVAMHHIK ENYSFWFVYR  120
GNSTFKVHIF NSNGHEKATS CSKPPSESFG GVPPAATCDH HVLNEQVPSV SGNVQTSTDS  180
GYSMLPGCHL TKAQDEKVRE LACTMRSQVP LYVAVMNKSN VNLKDCSVNL PLKLVEHFKE  240
DTSKATIQLE APNDMIYGVE ACKHGDDQIV LQYGWNNLVD ANRIQENDLL VFITKGTKRL  300
EVRILGTSVH QRTSSCFDVG NISSTQEIRE DSLEITDPPP HTDYYVSSSD DDHIMEEGYY  360
VSSSDDDHIA EEDYVSSSDA DHIVEEGTRK SGRRQKQAPS RYAKAQKVAS TSSPSAAKSG  420
YSAIYTSAFS FYQFPNCFWL SYAYLMRVVQ AFQDMKLTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	2e-11	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG043800.5