PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG043800.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 519aa    MW: 58283.4 Da    PI: 6.6025
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG043800.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.24.6e-11153237997
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                        +lk + + lp k +e+++++ +++ t++le ++   + v+   +k+++  +vl+ GW++ v+an+++e+D +vF  +g  +++l v+++
  TRIDC4AG043800.3 153 VNLKDCSVNLPLKLVEHFKED-TSKATIQLEAPNDMIYGVEA--CKHGDDqIVLQYGWNNLVDANRIQENDLLVFITKG--TKRLEVRIL 237
                       45678999*******777666.5678****************..5555545*************************665..444577776 PP
2B343.36.8e-14419515399
                       EE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   3 kvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                        v ++++  + ++l +  ++ ++h       ++++l+l+ e g + + +l ++++++r ++++GW++Fv +n+++egD+++F++ ++ ++ ++
  TRIDC4AG043800.3 419 VVVMTKSRINADQLGFRMEYGARHipH--LGRKMDLMLQAEGGTEQRTRLVIDQNGKR-WIRRGWQQFVTENKVREGDICLFERGEStKKLRM 508
                       455677777778899999998899652..347799***************99888877.79**********************8877799999 PP

                       EEEEE-S CS
                B3  93 vvkvfrk 99 
                       +v ++rk
  TRIDC4AG043800.3 509 TVYFIRK 515
                       9999887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 519 aa     Download sequence    
MISETIKLEA PNGIFLIGVC RKTGELVLRA GWDKFVAMHH IKENYSFWFV YRGNSTFKVH  60
IFNSNGHEKA TSCSKPPSES FGGVPPAATC DHHVLNEQVP SVSGNVQTST DSGYSMLPGC  120
HLTKAQDEKV RELACTMRSQ VPLYVAVMNK SNVNLKDCSV NLPLKLVEHF KEDTSKATIQ  180
LEAPNDMIYG VEACKHGDDQ IVLQYGWNNL VDANRIQEND LLVFITKGTK RLEVRILGTS  240
VHQRTSSCFD VGNISSTQEI REDSLEITDP PPHTDYYVSS SDDDHIMEEG YYVSSSDDDH  300
IAEEDYVSSS DADHIVEEGT RKSGRRQKQA PSRYAKAQKV ASTSSPSAAK SGYEAHKLNE  360
RASVEFGINL EPHSSTSNLE GPSQYPYVLS EGRTSLSSVE KEKVEEKVQA IQSELPIFVV  420
VMTKSRINAD QLGFRMEYGA RHIPHLGRKM DLMLQAEGGT EQRTRLVIDQ NGKRWIRRGW  480
QQFVTENKVR EGDICLFERG ESTKKLRMTV YFIRKSSQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.18e-07B3 family protein