PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG043000.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 269aa    MW: 28970.3 Da    PI: 9.8198
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG043000.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.53.8e-32174230158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       +ep+YVNaKQy++Il+RRq+Rak+e e+k  +k+rkpylheSRh+hA+rR+Rg+gGrF
  TRIDC4AG043000.1 174 EEPVYVNAKQYHGILRRRQSRAKAELERKA-IKARKPYLHESRHQHAMRRARGTGGRF 230
                       69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    
MSGMGSRPGE SNLVEPRGLP SGMAMQPWWT GTGFGAVSPA VVAPGSGAGI SLSSNPLGGG  60
AGKGATTQGK KKTADDDPRA ESSDDDSQRS GEPKDGSFEV ENQRATSRMP ALATDYLAPY  120
SHLELNQPMA SATYPYPDAY YTGMVGPYGA QAVAHFQLPG LTHPRMPLPL EVSEEPVYVN  180
AKQYHGILRR RQSRAKAELE RKAIKARKPY LHESRHQHAM RRARGTGGRF LNTKKDENGA  240
SNGGRTEANK GEQSSDYLRV PPDLHLRQA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.22e-41NF-YA family protein