PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG042210.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 397aa    MW: 43057.7 Da    PI: 5.5788
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG042210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS4662.1e-14293931374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl...fsevsPi 90 
                       lv++Ll+cAeav+++++++a+al++++  la+++g +m+++aayf eALa+r++r        ++p+++s  +  ++++a+ l   f+e +P+
  TRIDC4AG042210.1   9 LVHALLACAEAVQQENFSAAEALVKQIPLLAASQGGAMRKVAAYFGEALARRVFR--------FRPQPDS--SLLDAAFADLLhahFYESCPY 91 
                       689****************************************************........5555555..34444444444456******* PP

              GRAS  91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlva 183
                       lkf+h+taNqaIlea++g++rvH++Df+i+qG+QWpaLlqaLa Rp+gpps+R+Tgvg+p+++++++l+++g++La+fA++++v+f+++ lva
  TRIDC4AG042210.1  92 LKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVA 184
                       ********************************************************************************************* PP

              GRAS 184 krledleleeLrvkp.......gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
                        +l+dle+ +L+ +         E++aVn+v+++hrll+++++le+    vL +v+ ++P++v+vveqea+hns++Fl+rf+e+l+yys++fd
  TRIDC4AG042210.1 185 ATLADLEPFMLQPEGeedpneePEVIAVNSVFEMHRLLAQPGALEK----VLGTVRAVRPRIVTVVEQEANHNSGTFLDRFTESLHYYSTMFD 273
                       ***********544444557789***********************....******************************************* PP

              GRAS 270 sleak..............lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sd 347
                       sle +              +p+++ +++++++++lgr+i+nvvacegaer+erhetl++Wr+rl++aGF++v+l+++a+kqa++ll+ ++ +d
  TRIDC4AG042210.1 274 SLEGGssggpsevssgaaaAPAAAGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGNAGFETVHLGSNAYKQASTLLALFAgGD 366
                       **98889**********9999999********************************************************************* PP

              GRAS 348 gyrveeesgslvlgWkdrpLvsvSaWr 374
                       gy+vee++g+l+lgW++rpL+++SaWr
  TRIDC4AG042210.1 367 GYKVEEKEGCLTLGWHTRPLIATSAWR 393
                       **************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 397 aa     Download sequence    
DTQEAGIRLV HALLACAEAV QQENFSAAEA LVKQIPLLAA SQGGAMRKVA AYFGEALARR  60
VFRFRPQPDS SLLDAAFADL LHAHFYESCP YLKFAHFTAN QAILEAFAGC RRVHVVDFGI  120
KQGMQWPALL QALALRPGGP PSFRLTGVGP PQPDETDALQ QVGWKLAQFA HTIRVDFQYR  180
GLVAATLADL EPFMLQPEGE EDPNEEPEVI AVNSVFEMHR LLAQPGALEK VLGTVRAVRP  240
RIVTVVEQEA NHNSGTFLDR FTESLHYYST MFDSLEGGSS GGPSEVSSGA AAAPAAAGTD  300
QVMSEVYLGR QICNVVACEG AERTERHETL GQWRNRLGNA GFETVHLGSN AYKQASTLLA  360
LFAGGDGYKV EEKEGCLTLG WHTRPLIATS AWRLAAP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.10.0GRAS family protein