PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG042060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GeBP | ||||||||
Protein Properties | Length: 291aa MW: 32530.7 Da PI: 7.1446 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 84.4 | 1.6e-26 | 87 | 181 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 +fqr+wse+De+ +LqGl+ + +g d++ fy+ +++s+ +++sql+eK+rrLK+K ++ ++++++g +p+ ++hd+++++l+++ TRIDC4AG042060.1 87 KFQRIWSESDELRFLQGLLGC-GAQGLVFPRDLNVFYDRFSESMPQPYTRSQLSEKLRRLKNKHRNVSSRVARGLDPARLAPHDRDVLHLCSR 178 79*******************.556878888************************************************************** PP DUF573 95 iWg 97 +W+ TRIDC4AG042060.1 179 LWD 181 **8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 60 XXXXXXXXXX XXXXXXXXXX GQNPPFKFQR IWSESDELRF LQGLLGCGAQ GLVFPRDLNV 120 FYDRFSESMP QPYTRSQLSE KLRRLKNKHR NVSSRVARGL DPARLAPHDR DVLHLCSRLW 180 DPANAATSPF AAAAAPAGSS GNKRRRSNPA VVPLDVPAPS GDSNSHGYNG ISSSAPGAAF 240 PDDNGAEDVM YLEQESGHHL YFDEGAAFVA DGNLDGLPKM LSTMEVIPKM L |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04930.2 | 2e-12 | GeBP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG042060.1 |