PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG041150.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 408aa MW: 42784.9 Da PI: 4.8951

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG041150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.6	1.7e-11	226	268	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 +ErrRR+++N+++ Lr+++P + K++ a+iL A+eY+k+L TRIDC4AG041150.1 226 LAERRRRKKLNDRLYALRSVVPRiS------KMDRASILGDAIEYLKEL 268 58*******************66......**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
PAPATVEASG SSSGFGDASQ MFPLLDVPGF DLDISGDLSA FLGAGNAPNA SLLPHGNTDF 60 LGSFGGFGTA PAQTTDFGDL AGFDLFDTGA PGWSGPSSEG PAAPAPQTAA FSGQGNAKVL 120 RPLENFPASG AQPTLFQKRA LRRNAGEEDG GRKRKAAEPD IILDDADDDI ISIDASGLNY 180 DSEDGRGVEE SGRKDGNESN ANSTVTGGAA AEGNGKKKGM PAKNLLAERR RRKKLNDRLY 240 ALRSVVPRIS KMDRASILGD AIEYLKELKQ KINVLQNELE ASPSASSLPP TPTSIHPLAP 300 TTPTMPALPS RVKEELTSSP AQEPCVEVKL REGRAVNIRM MCSRRPGVVH SSLKALEGLG 360 LDVQQAVISY FNDFTLDVFK AECKDGPGPQ AEEIKAVLLK SAGFQPAA

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

PAPATVEASG SSSGFGDASQ MFPLLDVPGF DLDISGDLSA FLGAGNAPNA SLLPHGNTDF  60
LGSFGGFGTA PAQTTDFGDL AGFDLFDTGA PGWSGPSSEG PAAPAPQTAA FSGQGNAKVL  120
RPLENFPASG AQPTLFQKRA LRRNAGEEDG GRKRKAAEPD IILDDADDDI ISIDASGLNY  180
DSEDGRGVEE SGRKDGNESN ANSTVTGGAA AEGNGKKKGM PAKNLLAERR RRKKLNDRLY  240
ALRSVVPRIS KMDRASILGD AIEYLKELKQ KINVLQNELE ASPSASSLPP TPTSIHPLAP  300
TTPTMPALPS RVKEELTSSP AQEPCVEVKL REGRAVNIRM MCSRRPGVVH SSLKALEGLG  360
LDVQQAVISY FNDFTLDVFK AECKDGPGPQ AEEIKAVLLK SAGFQPAA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	216	234	KKKGMPAKNLLAERRRRKK
2	228	235	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	3e-68	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG041150.1