PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG040730.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 294aa    MW: 32697.3 Da    PI: 5.7135
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG040730.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS304.33e-93229484374
              GRAS  84 fsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelg 173
                       +++++P+ kf+hltaNqaIlea+  ++++Hi+Df+i qG+QW+aLlqaLa+Rpeg+p ++Ri gv sp  g   + +l +t  rL++fA+ lg
  TRIDC4AG040730.2   2 LNDACPYSKFAHLTANQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPsRIRISGVPSPYLGphPAASLAATSARLRDFAQLLG 94 
                       899**************************************************887769********99888899****************** PP

              GRAS 174 vpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysa 266
                       v+fef + + + +++l+ ++++v+p+E++aVn++lql++ll   ++++++ +++L+l ksl P vv++ e e+++n++ F++rf++al+yy a
  TRIDC4AG040730.2  95 VDFEFVP-LLRPVHELDRSDFSVDPDEVVAVNFMLQLYHLL---GDSDEPVRRLLRLAKSLGPAVVTLGEYEVSLNRAGFVDRFASALSYYRA 183
                       *******.599******************************...66666777***************************************** PP

              GRAS 267 lfdsleaklpreseerikvErellgreivnvva.cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgs 357
                       +f+sl++ ++r+se+r+++Er ++g++i+ +v   ega+r+ r+   ++W++ +e +GF+pv+ls++a++qa+lll  ++ +  y++ +   +
  TRIDC4AG040730.2 184 VFESLDVAMARDSEDRATLERSMFGERIRRAVGpPEGADRTDRMAGSAEWQALMEWCGFQPVRLSNYAESQAELLLWDYDaKYKYSLVQLPPA 276
                       ********************************83699*******************************************8888999999998 PP

              GRAS 358 lv.lgWkdrpLvsvSaWr 374
                       ++ l W++rpL++vSaWr
  TRIDC4AG040730.2 277 FLsLAWEKRPLLTVSAWR 294
                       888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
TLNDACPYSK FAHLTANQAI LEATGAATKI HIVDFGIVQG IQWAALLQAL ATRPEGKPSR  60
IRISGVPSPY LGPHPAASLA ATSARLRDFA QLLGVDFEFV PLLRPVHELD RSDFSVDPDE  120
VVAVNFMLQL YHLLGDSDEP VRRLLRLAKS LGPAVVTLGE YEVSLNRAGF VDRFASALSY  180
YRAVFESLDV AMARDSEDRA TLERSMFGER IRRAVGPPEG ADRTDRMAGS AEWQALMEWC  240
GFQPVRLSNY AESQAELLLW DYDAKYKYSL VQLPPAFLSL AWEKRPLLTV SAWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.11e-121GRAS family protein