PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG040600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 290aa    MW: 33373.2 Da    PI: 8.4744
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG040600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR159.79.2e-19112197191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fY+ YAk+ GF v ++++++  +++ +t  t+ Cs++gk++ ++k+   +  ++++tr++C ak + +++ ++k+++t+l l+HnH+++p
  TRIDC4AG040600.1 112 RFYKGYAKKKGFGVMRRTTRYG-EDNMVTYFTLACSRQGKTQCSEKN---SFMPNPSTRMQCPAKSNFSRR-EEKFCITSLTLDHNHPISP 197
                       5***************999998.5666****************9999...999*****************9.9**************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
PIYTCFRLNI ILPLQHLIAL INPIYTCSTL NICLPLYNIS DLFVGNFRYS IEPGLNLDEV  60
AEQNRPVLDE DDEDAFIVEE IGDSSDERQV KPIRTLESRK GMVFDSEDDA VRFYKGYAKK  120
KGFGVMRRTT RYGEDNMVTY FTLACSRQGK TQCSEKNSFM PNPSTRMQCP AKSNFSRREE  180
KFCITSLTLD HNHPISPSKS RFFRCHKKLD LHSKRRLELN DQAGIRMNKN FGSLVMEAGG  240
YGNLEFGEKE CRNAREKKAA TWCWRCTCCL SIFSSYAIKR SRLFPCYGCG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.19e-07FAR1 family protein