PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG040020.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 316aa    MW: 34922.1 Da    PI: 6.4255
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG040020.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.91.2e-10147195355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC4AG040020.6 147 NSHSLAERLRRKKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 195
                       58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MYSGQQSDQG PAANSGKEFL EGNWGSVAMH QKMGYDSAAY GFQAYGMELE ERPGAFSQNI  60
QMSDEHSGGV KKRKGTDDCI ALLNPSASSK NVGDQQTEVS SQPERNSVER DNRKISPKTQ  120
SKEDSSDGDG TKENYVHFRA KRGQATNSHS LAERLRRKKI SERMKLLQDL VPGCNKITGK  180
AVMLDEIINY VQSLQRQVEF LSMKLATVNP ELGFDIEQIL SKQMMLSQDR RLGFYGADPG  240
SSALIAHFNQ GMMHPDMICN ASNPAGALHG TIHDISMMNQ MPEMWETLQN IPHMNFNPAV  300
AADSSTNNAG PMKIEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.15e-56bHLH family protein