PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG040020.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 270aa    MW: 29805.7 Da    PI: 6.7177
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG040020.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.4e-11102150355
                        HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC4AG040020.11 102 NSHSLAERLRRKKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 150
                        58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
MEMAIILAGA FSQNIQMSDE HSGGVKKRKG TDDCIALLNP SASSKNVGDQ QTEVSSQPER  60
NSVERDNRKI SPKTQSKEDS SDGDGTKENY VHFRAKRGQA TNSHSLAERL RRKKISERMK  120
LLQDLVPGCN KITGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPELGFD IEQILSKQMM  180
LSQDRRLGFY GADPGSSALI AHFNQGMMHP DMICNASNPA GALHGTIHDI SMMNQMPEMW  240
ETLQNIPHMN FNPAVAADSS TNNAGICDVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-56bHLH family protein