PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG040020.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 255aa    MW: 28285.9 Da    PI: 7.2549
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG040020.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.5e-1186134355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  TRIDC4AG040020.1  86 NSHSLAERLRRKKISERMKLLQDLVPGC----NKITGKAVMLDEIINYVQSLQ 134
                       58**************************....999*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MSDEHSGGVK KRKGTDDCIA LLNPSASSKN VGDQQTEVSS QPERNSVERD NRKISPKTQS  60
KEDSSDGDGT KENYVHFRAK RGQATNSHSL AERLRRKKIS ERMKLLQDLV PGCNKITGKA  120
VMLDEIINYV QSLQRQVEFL SMKLATVNPE LGFDIEQILS KQMMLSQDRR LGFYGADPGS  180
SALIAHFNQG MMHPDMICNA SNPAGALHGT IHDISMMNQM PEMWETLQNI PHMNFNPAVA  240
ADSSTNNAGP MKIEQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.13e-56bHLH family protein