PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG039160.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

GATA

Protein Properties

Length: 196aa MW: 21226.5 Da PI: 10.3238

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG039160.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	51.3	1.6e-16	137	173	1	35
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nCg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ TRIDC4AG039160.8 137 CQNCGVSSrlTPAMRRGPAGPRTLCNACGLMWANKGT 173 **********************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 196 aa Download sequence
DALLSAASEQ LTLVYQGEVY VFDPVPPQKV QAALLVLGGC EVPPGLVSMA GPTAYGEKST 60 TVAAKRVASL MRFREKRKER CFDKKIRYGV RKEVAQKMKR RKGQFAGRAD FGDAASSSAA 120 CVSAADGEDD HFRESHCQNC GVSSRLTPAM RRGPAGPRTL CNACGLMWAN KGTLRSPLNA 180 PKMTVQHPAN LNKMVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21175.2	5e-52	GATA family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG039160.8