PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG039160.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 242aa    MW: 26087.7 Da    PI: 8.5724
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG039160.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.92.2e-16138174135
              GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C+nCg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  TRIDC4AG039160.6 138 CQNCGVSSrlTPAMRRGPAGPRTLCNACGLMWANKGT 174
                       **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
ADALLSAASE QLTLVYQGEV YVFDPVPPQK VQAALLVLGG CEVPPGLVSM AGPTAYGEKS  60
TTVAAKRVAS LMRFREKRKE RCFDKKIRYG VRKEVAQKMK RRKGQFAGRA DFGDAASSSA  120
ACVSAADGED DHFRESHCQN CGVSSRLTPA MRRGPAGPRT LCNACGLMWA NKGTLRSPLN  180
APKMTVQHPA NLNKMDSVDD DKAIVCAEPN HTTVKMDSGM SPEQEQKPEL RPATEGDSMA  240
DS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.23e-53GATA family protein