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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG038680.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 348aa MW: 37950.7 Da PI: 10.3676 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 100.2 | 1.3e-31 | 282 | 339 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp+++++tYegeHnh+ TRIDC4AG038680.2 282 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPSMLIVTYEGEHNHT 339 9*************************988****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MEEVEEANRM AVESCHRVLG LLAQTQDPAQ LRSIALGTDE ACAKFRKVVS LLGNGNGNGN 60 EGGGTHHPRA KLVSRRQTPG FLSQKSFLDN NTPVVVLNSA HPSTSSAQVY PSSRNSILDS 120 SQAAHPIGGP PKLVQPLSAH FQFGDSSRYN QFQQQHQHQQ QKMRAEMFKR SNSGINLKFD 180 SPSGTGTMSS ARSFMSSLSM DGSVASLDAK SSSFHLIGGP AMSDPVNAQQ APRRRCSGRG 240 EDGNGKCAAT GRCHCSKRRK LRVKRTIKVP AISNKIADIP PDEYSWRKYG QKPIKGSPHP 300 RGYYKCSSVR GCPARKHVER CVDDPSMLIV TYEGEHNHTR MPTQSAQA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04670.1 | 2e-82 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG038680.2 |