PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038200.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 538aa    MW: 61569.2 Da    PI: 6.3593
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038200.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.86.1e-16341121498
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + +++p +f++++ g+   +++++l++++g s+++ +   k++++ vl++GW+ Fvk  +L   D vvF+++g+s+f   v vf+
  TRIDC4AG038200.3  34 QEMIVPDEFLRRFRGE--IPREIRLQTRNGHSYTIGV--AKYPDKLVLQAGWETFVKTYDLHMDDCVVFRYKGNSQF--DVIVFD 112
                       46899********776..6779***************..**********************************9999..776666 PP
2B347.33.7e-15354445196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       f+ v+ + +v+ ++ l+++kk++++h g+ke+   + l ++ g++W+v++  + + +   + +GW++Fvk+n++++gD+++F+l +  +  ++
  TRIDC4AG038200.3 354 FVAVMRRFNVTGTCTLTFSKKYVQTHVGDKERR--ICL-QRCGKRWDVQF--SSSVEVKRIVSGWRKFVKDNDVETGDICIFELLKIdEMCTM 441
                       5566777789999*************7787664..665.569********..5555556688*********************7644354456 PP

                       EEEE CS
                B3  93 vvkv 96 
                        v++
  TRIDC4AG038200.3 442 EVHI 445
                       6666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    
MGCERCERRD ELDYCNLDDR EKHFLMFIVD DCGQEMIVPD EFLRRFRGEI PREIRLQTRN  60
GHSYTIGVAK YPDKLVLQAG WETFVKTYDL HMDDCVVFRY KGNSQFDVIV FDRFGREKAF  120
SVIRDSAPPV QESHNSGTEN LDRSHGHSQP MEVQSPIENA NHPEGRPQPM RMQPPTENAN  180
PSHAHPQPMR MQPPTENLDD PVGFSPPTEN VNNLFGHSQP TQMQPSTEAV HHFAQMQPST  240
EAVDHSNGHA LTMQMQPSSE VVDHSNGHAQ TMQMQLFCRP TKLRQTMLQW DYSSMGNETA  300
PSPSDTPNSL SSEHDIEGCA SPRYTLIYNT SLNTVQKEEV DEQVKSIHKD NPIFVAVMRR  360
FNVTGTCTLT FSKKYVQTHV GDKERRICLQ RCGKRWDVQF SSSVEVKRIV SGWRKFVKDN  420
DVETGDICIF ELLKIDEMCT MEVHIIHAKD FDRPSQIGGR SVDGWCKEAT TKTVEPSHSR  480
PQLVKMQLRN ASVEDSYSRP QPMEMQSPSK ERKIRVETVN SSLGNEGEIL RCQRIVSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-14B3 family protein