PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG038200.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 671aa    MW: 76587.8 Da    PI: 7.5617
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG038200.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.48.5e-16341121498
                       T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       + +++p +f++++ g+   +++++l++++g s+++ +   k++++ vl++GW+ Fvk  +L   D vvF+++g+s+f   v vf+
  TRIDC4AG038200.1  34 QEMIVPDEFLRRFRGE--IPREIRLQTRNGHSYTIGV--AKYPDKLVLQAGWETFVKTYDLHMDDCVVFRYKGNSQF--DVIVFD 112
                       46899********776..6779***************..**********************************9999..776666 PP
2B346.95.1e-15355446196
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                       f+ v+ + +v+ ++ l+++kk++++h g+ke+   + l ++ g++W+v++  + + +   + +GW++Fvk+n++++gD+++F+l +  +  ++
  TRIDC4AG038200.1 355 FVAVMRRFNVTGTCTLTFSKKYVQTHVGDKERR--ICL-QRCGKRWDVQF--SSSVEVKRIVSGWRKFVKDNDVETGDICIFELLKIdEMCTM 442
                       5566777789999*************7787664..665.569********..5555556688*********************7644354446 PP

                       EEEE CS
                B3  93 vvkv 96 
                        v++
  TRIDC4AG038200.1 443 EVHI 446
                       6666 PP
3B342.11.6e-13576666599
                       -..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EEEE CS
                B3   5 ltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvvkv 96 
                       + + +v+ +  l+++kk++++h g++ +s  +    ++g++ +v+l   ++++     +GW +F+k+ngL++gD++++++ ++ +e +++v++
  TRIDC4AG038200.1 576 MQKTNVTGRFALSISKKYVRRHLGDEVRS--IW-LERDGERCQVTL--GRGPQNNRVVGGWVKFAKENGLRTGDVCLLERLRHcKECTMKVHI 663
                       56677888999***********8887776..55.457*********..9999999999*********************99988999999999 PP

                       E-S CS
                B3  97 frk 99 
                       +r+
  TRIDC4AG038200.1 664 VRR 666
                       987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 671 aa     Download sequence    
MGCERCERRD ELDYCNLDDR EKHFLMFIVD DCGQEMIVPD EFLRRFRGEI PREIRLQTRN  60
GHSYTIGVAK YPDKLVLQAG WETFVKTYDL HMDDCVVFRY KGNSQFDVIV FDRFGREKAF  120
SVIRDSAPPV QESHNSGTEN LDRSHGHSQP MEVQSPIENA NHPEGRPQPM RMQPPTENAN  180
PSHAHPQPMR MQPPTENLDD PVGFSPPTEN VNNLFGHSQP TQMQPSTEAV HHFAQMQPST  240
EAVDHSNGHA LTMQMQPSSE VVDHSNGHAQ TMQMQLFCRP TKLRQTMLQW DYSSMGNETA  300
PSPSDTPRDS LSSEHDIEGC ASPRYTLIYN TSLNTVQKEE VDEQVKSIHK DNPIFVAVMR  360
RFNVTGTCTL TFSKKYVQTH VGDKERRICL QRCGKRWDVQ FSSSVEVKRI VSGWRKFVKD  420
NDVETGDICI FELLKIDEMC TMEVHIIHAK DFDRPSQIGG RSVDGWCKEA TTKTVEPSHS  480
RPQLVKMQLR NASVEDSYSR PQPMEMQSPS KERKIRVETV NSSLGNEGDS SMSEDSVTLT  540
GCIGVHLRRI PLIQKKVVKQ KVDLIGSEIP ICVLVMQKTN VTGRFALSIS KKYVRRHLGD  600
EVRSIWLERD GERCQVTLGR GPQNNRVVGG WVKFAKENGL RTGDVCLLER LRHCKECTMK  660
VHIVRRVKRA G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.19e-14B3 family protein