PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG036980.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 312aa MW: 34014.6 Da PI: 4.4667

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG036980.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.4	4.1e-11	239	279	10	55
HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r+RR++iN+++ L+ l+P+ +K++ +++Le+AveY+k Lq TRIDC4AG036980.1 239 RKRREKINERLKVLQNLVPNG-----TKVDISTMLEEAVEYVKFLQ 279 9****************97.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 312 aa Download sequence
MESGGVITEA GWDSLGLTSQ AEESEMMEQL LGTFPSNGEE EHQELPWSVQ ATHAYYAHCN 60 GSSNAYSSAS SNSVGSLVLD MPSDYGGFYL GDSNGIGSCT AALDLNMVQE QGAAQFMDAI 120 FNPSYGNGDS SCDDLGDLSM NLLDSIDTSN KRKRQDQGKI ADQTSGRKYS RKADSKRTKK 180 AMQCEGDDGT TTDTNKQSLS CCTSEIDSNA SQEPPVASKP KSKAQAGRQT TDPQSLYARK 240 RREKINERLK VLQNLVPNGT KVDISTMLEE AVEYVKFLQL QIKLLSSDEM WMYAPIAYNG 300 MNIGIDLNLS QH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	151	176	KRKRQDQGKIADQTSGRKYSRKADSK
2	239	244	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G14760.1	1e-46	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG036980.1