PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG036450.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 660aa MW: 73208.1 Da PI: 7.1909

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG036450.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.3	1.7e-29	301	351	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC4AG036450.8 301 EKNVSLKVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 351 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MICKPKAFLI ILIVTFVILQ SVQLSTVQAR THPQSLTRNQ QSVLTEILDV LKAVCHTHML 60 PLALAWIPVC PNSNLNVSAE YGDQAIKFGL RNKDVLCVQE SACYINDMRM HDFLRACAEH 120 PLEKGQGVAG NAILSNHPFF SSDVREYDMH DYPLVHHARK FGLHAAVAIR LRSTYTGNDD 180 YVLEFFLPLT CKVREEQQLL LDDISMTMQR VCSSLRTVSD AELKENTIIM QSAIRCSSSD 240 VSINSCDQID VSSEVKKYAK QFEPGSTSEN FQNCSSTGKN VSLTVLQEST SDRLQIRSST 300 EKNVSLKVLQ QYFAGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKIKK VNRSLQKIQN 360 VISTVHGVEG EIKYDPATGC IVSSVSHTEE SSMMMNVEHQ SSDSLPIECH KFQPDYDAYQ 420 REHLGQAVLH KAQNDKRSET HINLNPGGLC RNSNFGRTSK GPRCQDASNS SYLTKEMISA 480 DGTDMWVEGA EQKNVVWNSI SMPQQCKIEI ETDKSNTIVE QSLASSSSMT DCSSGGTSSD 540 GTLKKCFKSR SVDGSNASIV VKAAYKDDTV RLKLLPSMKY ENLLEEIAKR LKLSVGAFQL 600 KYKDDEDEWV ILASDADLQE CLDVLDTTGS RIVKIQVRDV PCATRAASGS SSISLVDRSG

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MICKPKAFLI ILIVTFVILQ SVQLSTVQAR THPQSLTRNQ QSVLTEILDV LKAVCHTHML  60
PLALAWIPVC PNSNLNVSAE YGDQAIKFGL RNKDVLCVQE SACYINDMRM HDFLRACAEH  120
PLEKGQGVAG NAILSNHPFF SSDVREYDMH DYPLVHHARK FGLHAAVAIR LRSTYTGNDD  180
YVLEFFLPLT CKVREEQQLL LDDISMTMQR VCSSLRTVSD AELKENTIIM QSAIRCSSSD  240
VSINSCDQID VSSEVKKYAK QFEPGSTSEN FQNCSSTGKN VSLTVLQEST SDRLQIRSST  300
EKNVSLKVLQ QYFAGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKIKK VNRSLQKIQN  360
VISTVHGVEG EIKYDPATGC IVSSVSHTEE SSMMMNVEHQ SSDSLPIECH KFQPDYDAYQ  420
REHLGQAVLH KAQNDKRSET HINLNPGGLC RNSNFGRTSK GPRCQDASNS SYLTKEMISA  480
DGTDMWVEGA EQKNVVWNSI SMPQQCKIEI ETDKSNTIVE QSLASSSSMT DCSSGGTSSD  540
GTLKKCFKSR SVDGSNASIV VKAAYKDDTV RLKLLPSMKY ENLLEEIAKR LKLSVGAFQL  600
KYKDDEDEWV ILASDADLQE CLDVLDTTGS RIVKIQVRDV PCATRAASGS SSISLVDRSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-117	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG036450.8