PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG036450.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 601aa MW: 66572.2 Da PI: 6.7676

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG036450.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	93.5	1.5e-29	242	292	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC4AG036450.7 242 EKNVSLKVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 292 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 601 aa Download sequence
MLPLALAWIP VCPNSNLNVS AEYGDQAIKF GLRNKDVLCV QESACYINDM RMHDFLRACA 60 EHPLEKGQGV AGNAILSNHP FFSSDVREYD MHDYPLVHHA RKFGLHAAVA IRLRSTYTGN 120 DDYVLEFFLP LTCKVREEQQ LLLDDISMTM QRVCSSLRTV SDAELKENTI IMQSAIRCSS 180 SDVSINSCDQ IDVSSEVKKY AKFEPGSTSE NFQNCSSTGK NVSLTVLQES TSDRLQIRSS 240 TEKNVSLKVL QQYFAGSLKD AAKSIGVCPT TLKRICRQHG ISRWPSRKIK KVNRSLQKIQ 300 NVISTVHGVE GEIKYDPATG CIVSSVSHTE ESSMMMNVEH QSSDSLPIEC HKFQPDYDAY 360 QREHLGQAVL HKAQNDKRSE THINLNPGGL CRNSNFGRTS KGPRCQDASN SSYLTKEMIS 420 ADGTDMWVEG AEQKNVVWNS ISMPQQCKIE IETDKSNTIV EQSLASSSSM TDCSSGGTSS 480 DGTLKKCFKS RSVDGSNASI VVKAAYKDDT VRLKLLPSMK YENLLEEIAK RLKLSVGAFQ 540 LKYKDDEDEW VILASDADLQ ECLDVLDTTG SRIVKIQVRD VPCATRAASG SSSISLVDRS 600 G

Sequence ? help Back to Top

Protein Sequence Length: 601 aa Download sequence

MLPLALAWIP VCPNSNLNVS AEYGDQAIKF GLRNKDVLCV QESACYINDM RMHDFLRACA  60
EHPLEKGQGV AGNAILSNHP FFSSDVREYD MHDYPLVHHA RKFGLHAAVA IRLRSTYTGN  120
DDYVLEFFLP LTCKVREEQQ LLLDDISMTM QRVCSSLRTV SDAELKENTI IMQSAIRCSS  180
SDVSINSCDQ IDVSSEVKKY AKFEPGSTSE NFQNCSSTGK NVSLTVLQES TSDRLQIRSS  240
TEKNVSLKVL QQYFAGSLKD AAKSIGVCPT TLKRICRQHG ISRWPSRKIK KVNRSLQKIQ  300
NVISTVHGVE GEIKYDPATG CIVSSVSHTE ESSMMMNVEH QSSDSLPIEC HKFQPDYDAY  360
QREHLGQAVL HKAQNDKRSE THINLNPGGL CRNSNFGRTS KGPRCQDASN SSYLTKEMIS  420
ADGTDMWVEG AEQKNVVWNS ISMPQQCKIE IETDKSNTIV EQSLASSSSM TDCSSGGTSS  480
DGTLKKCFKS RSVDGSNASI VVKAAYKDDT VRLKLLPSMK YENLLEEIAK RLKLSVGAFQ  540
LKYKDDEDEW VILASDADLQ ECLDVLDTTG SRIVKIQVRD VPCATRAASG SSSISLVDRS  600
G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-106	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG036450.7