PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG036450.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 898aa MW: 98529 Da PI: 5.2436

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG036450.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92.8	2.5e-29	539	589	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++ TRIDC4AG036450.3 539 EKNVSLKVLQQYFAGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 589 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 898 aa Download sequence
MDENGTPDYS GGGSDMDLLM LSGFDDLDSF PELGAGPSFS DGILSSFSVS PAQQVTHISP 60 SPPSVDAEEQ GDVSITDGSD CSVSLASNEV MNVSAPTVPK TVYGGVTLTE KMLRALAMLK 120 EASTAGPVLV QVWIPVRNGD HQVLTTSDQP FLLDERLTGY REVSRQFTFS ATEGPGLFPG 180 LPGRVFISGM PEWTSNVMYY NTSEFLRVDY AIRNEVRGSL AMPVFNSSGG SCCAVLEVVM 240 TQEKDNFCSE MDNLSNALQS VQLSTVQART HPQSLTRNQQ SVLTEILDVL KAVCHTHMLP 300 LALAWIPVCP NSNLNVSAEY GDQAIKFGLR NKDVLCVQES ACYINDMRMH DFLRACAEHP 360 LEKGQGVAGN AILSNHPFFS SDVREYDMHD YPLVHHARKF GLHAAVAIRL RSTYTGNDDY 420 VLEFFLPLTC KVREEQQLLL DDISMTMQRV CSSLRTVSDA ELKENTIIMQ SAIRCSSSDV 480 SINSCDQIDV SSEVKKYAKF EPGSTSENFQ NCSSTGKNVS LTVLQESTSD RLQIRSSTEK 540 NVSLKVLQQY FAGSLKDAAK SIGVCPTTLK RICRQHGISR WPSRKIKKVN RSLQKIQNVI 600 STVHGVEGEI KYDPATGCIV SSVSHTEESS MMMNVEHQSS DSLPIECHKF QPDYDAYQRE 660 HLGQAVLHKA QNDKRSETHI NLNPGGLCRN SNFGRTSKGP RCQDASNSSY LTKEMISADG 720 TDMWVEGAEQ KNVVWNSISM PQQCKIEIET DKSNTIVEQS LASSSSMTDC SSGGTSSDGT 780 LKKCFKSRSV DGSNASIVVK AAYKDDTVRL KLLPSMKYEN LLEEIAKRLK LSVGAFQLKY 840 KDDEDEWVIL ASDADLQECL DVLDTTGSRI VKIQVRDVPC ATRAASGSSS ISLVDRSG

Sequence ? help Back to Top

Protein Sequence Length: 898 aa Download sequence

MDENGTPDYS GGGSDMDLLM LSGFDDLDSF PELGAGPSFS DGILSSFSVS PAQQVTHISP  60
SPPSVDAEEQ GDVSITDGSD CSVSLASNEV MNVSAPTVPK TVYGGVTLTE KMLRALAMLK  120
EASTAGPVLV QVWIPVRNGD HQVLTTSDQP FLLDERLTGY REVSRQFTFS ATEGPGLFPG  180
LPGRVFISGM PEWTSNVMYY NTSEFLRVDY AIRNEVRGSL AMPVFNSSGG SCCAVLEVVM  240
TQEKDNFCSE MDNLSNALQS VQLSTVQART HPQSLTRNQQ SVLTEILDVL KAVCHTHMLP  300
LALAWIPVCP NSNLNVSAEY GDQAIKFGLR NKDVLCVQES ACYINDMRMH DFLRACAEHP  360
LEKGQGVAGN AILSNHPFFS SDVREYDMHD YPLVHHARKF GLHAAVAIRL RSTYTGNDDY  420
VLEFFLPLTC KVREEQQLLL DDISMTMQRV CSSLRTVSDA ELKENTIIMQ SAIRCSSSDV  480
SINSCDQIDV SSEVKKYAKF EPGSTSENFQ NCSSTGKNVS LTVLQESTSD RLQIRSSTEK  540
NVSLKVLQQY FAGSLKDAAK SIGVCPTTLK RICRQHGISR WPSRKIKKVN RSLQKIQNVI  600
STVHGVEGEI KYDPATGCIV SSVSHTEESS MMMNVEHQSS DSLPIECHKF QPDYDAYQRE  660
HLGQAVLHKA QNDKRSETHI NLNPGGLCRN SNFGRTSKGP RCQDASNSSY LTKEMISADG  720
TDMWVEGAEQ KNVVWNSISM PQQCKIEIET DKSNTIVEQS LASSSSMTDC SSGGTSSDGT  780
LKKCFKSRSV DGSNASIVVK AAYKDDTVRL KLLPSMKYEN LLEEIAKRLK LSVGAFQLKY  840
KDDEDEWVIL ASDADLQECL DVLDTTGSRI VKIQVRDVPC ATRAASGSSS ISLVDRSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG036450.3