PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG035510.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | TCP | ||||||||
Protein Properties | Length: 204aa MW: 22226.9 Da PI: 9.774 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 140.7 | 1.2e-43 | 36 | 189 | 3 | 134 |
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksa 94 ++k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+eWLlqqa+pai ++tgt++ +a+++ a+s + as ++aa+++ TRIDC4AG035510.1 36 VAKRPTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETVEWLLQQAEPAIVAATGTGTVPANFStLAASLRPGAS----SRAAPFQ 124 689************************************************************9999988854444444444....3333333 PP TCP 95 a.kskksqksaasalnlakesr........................akarararertrekmrikn 134 + ++++q++ a++l ++ +++ a + +r+r+r++++ ++++ TRIDC4AG035510.1 125 HhLQHQPQHDVAAMLGFHGHHQhqllppppqqqhhhqhpeapqdpgAGEFMRKRYREADDLFKDT 189 33666666666666666665554566666666666666665556669999999999998887765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
FMGSLAMVPA ATPAGAQTAN HSQSITVAEP PSEKKVAKRP TKDRHTKVDG RGRRIRMPAL 60 CAARVFQLTR ELGHKTDGET VEWLLQQAEP AIVAATGTGT VPANFSTLAA SLRPGASSRA 120 APFQHHLQHQ PQHDVAAMLG FHGHHQHQLL PPPPQQQHHH QHPEAPQDPG AGEFMRKRYR 180 EADDLFKDTG RHQDPEGGGE PAQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72010.1 | 6e-48 | TCP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG035510.1 |