PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG034120.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 480aa MW: 53239.1 Da PI: 9.175

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG034120.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	47.6	2.9e-15	375	465	4	98
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++ s+v l lp +f++e+ ++ +++l+l +++g+sW+v++ y +++ l++GW +F +n+L+ D++vF+l + + +v++ TRIDC4AG034120.4 375 IMKESYVYVGFFLNLPCEFVRECL--PRAHRKLKLWNPQGKSWDVNYVYYSERCGGGLSGGWGKFSLDNNLEKFDVCVFELFL--KDNIKVHI 463 678899999999*********5..345568***********9977777788*********************764..23346666 PP E- CS B3 97 fr 98 +r TRIDC4AG034120.4 464 YR 465 55 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MGHFLTFRYD GRSQFSVVIF DGMCIEKPSA FHAKPRKNLV VKIESGKGDM DINAADPSQV 60 SAAPLEESNE TTRKRVTEMD ADGSTSKKRS SILENGMPEA SAVTCKVAST SLNVDMNTAD 120 PPEAVVVPLE ESNQTTRKRV REIDANGSAL EKSLRVREID ENDSALHKSS RVREIDANDS 180 ALHKSSRVRE IDANDSALQK SSRVREIDAK DSALQKSSRV REIDANDSAL QKSSRVREID 240 ANDSALQKSS RVREIDANDS ALQKSCIASN KDKKRCPAAS VGTYKSASTS LDSTEDSDSS 300 SSMLEQSISC IKSELTSPIR LGVSKDVARR GQTSATGKRL LRVLSQRPLI TEIQKDNALL 360 RAKQFKSKNP FGLQIMKESY VYVGFFLNLP CEFVRECLPR AHRKLKLWNP QGKSWDVNYV 420 YYSERCGGGL SGGWGKFSLD NNLEKFDVCV FELFLKDNIK VHIYRVVPEI TPFLPGPGKK

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MGHFLTFRYD GRSQFSVVIF DGMCIEKPSA FHAKPRKNLV VKIESGKGDM DINAADPSQV  60
SAAPLEESNE TTRKRVTEMD ADGSTSKKRS SILENGMPEA SAVTCKVAST SLNVDMNTAD  120
PPEAVVVPLE ESNQTTRKRV REIDANGSAL EKSLRVREID ENDSALHKSS RVREIDANDS  180
ALHKSSRVRE IDANDSALQK SSRVREIDAK DSALQKSSRV REIDANDSAL QKSSRVREID  240
ANDSALQKSS RVREIDANDS ALQKSCIASN KDKKRCPAAS VGTYKSASTS LDSTEDSDSS  300
SSMLEQSISC IKSELTSPIR LGVSKDVARR GQTSATGKRL LRVLSQRPLI TEIQKDNALL  360
RAKQFKSKNP FGLQIMKESY VYVGFFLNLP CEFVRECLPR AHRKLKLWNP QGKSWDVNYV  420
YYSERCGGGL SGGWGKFSLD NNLEKFDVCV FELFLKDNIK VHIYRVVPEI TPFLPGPGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	4e-09	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG034120.4