PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG034120.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 555aa MW: 61767.7 Da PI: 9.1334

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG034120.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	49.8	6e-16	17	96	13	98
TT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 13 sgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 rl +p +f ++ + ++++ ++l+ +sg++W +l ++ ++ kGWkeFv+++ ++ g f++F++dgrs+f v +f+ TRIDC4AG034120.2 17 GERLKIPPSFN-QYlQDQPTG--VVSLKGQSGNTWLAEL--ASDNEGLFFVKGWKEFVRDHSIEMGHFLTFRYDGRSQF--SVVIFD 96 5689****8.665777666..7***********..888888****************************99..777776 PP
2	B3	47.3	3.6e-15	450	539	4	97
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 +++ s+v l lp +f++e+ ++ +++l+l +++g+sW+v++ y +++ l++GW +F +n+L+ D++vF+l + + +v++ TRIDC4AG034120.2 450 IMKESYVYVGFFLNLPCEFVRECL--PRAHRKLKLWNPQGKSWDVNYVYYSERCGGGLSGGWGKFSLDNNLEKFDVCVFELFL--KDNIKVHI 538 678899999999*********5..345568***********9977777788*********************764..23346666 PP E CS B3 97 f 97 + TRIDC4AG034120.2 539 Y 539 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 555 aa Download sequence
GKFGQQFARV FLPQLYGERL KIPPSFNQYL QDQPTGVVSL KGQSGNTWLA ELASDNEGLF 60 FVKGWKEFVR DHSIEMGHFL TFRYDGRSQF SVVIFDGMCI EKPSAFHAKP RKNLVVKIES 120 GKGDMDINAA DPSQVSAAPL EESNETTRKR VTEMDADGST SKKRSSILEN GMPEASAVTC 180 KVASTSLNVD MNTADPPEAV VVPLEESNQT TRKRVREIDA NGSALEKSLR VREIDENDSA 240 LHKSSRVREI DANDSALHKS SRVREIDAND SALQKSSRVR EIDAKDSALQ KSSRVREIDA 300 NDSALQKSSR VREIDANDSA LQKSSRVREI DANDSALQKS CIASNKDKKR CPAASVGTYK 360 SASTSLDSTE DSDSSSSMLE QSISCIKSEL TSPIRLGVSK DVARRGQTSA TGKRLLRVLS 420 QRPLITEIQK DNALLRAKQF KSKNPFGLQI MKESYVYVGF FLNLPCEFVR ECLPRAHRKL 480 KLWNPQGKSW DVNYVYYSER CGGGLSGGWG KFSLDNNLEK FDVCVFELFL KDNIKVHIYR 540 VVPEITPFLP GPGKK

Sequence ? help Back to Top

Protein Sequence Length: 555 aa Download sequence

GKFGQQFARV FLPQLYGERL KIPPSFNQYL QDQPTGVVSL KGQSGNTWLA ELASDNEGLF  60
FVKGWKEFVR DHSIEMGHFL TFRYDGRSQF SVVIFDGMCI EKPSAFHAKP RKNLVVKIES  120
GKGDMDINAA DPSQVSAAPL EESNETTRKR VTEMDADGST SKKRSSILEN GMPEASAVTC  180
KVASTSLNVD MNTADPPEAV VVPLEESNQT TRKRVREIDA NGSALEKSLR VREIDENDSA  240
LHKSSRVREI DANDSALHKS SRVREIDAND SALQKSSRVR EIDAKDSALQ KSSRVREIDA  300
NDSALQKSSR VREIDANDSA LQKSSRVREI DANDSALQKS CIASNKDKKR CPAASVGTYK  360
SASTSLDSTE DSDSSSSMLE QSISCIKSEL TSPIRLGVSK DVARRGQTSA TGKRLLRVLS  420
QRPLITEIQK DNALLRAKQF KSKNPFGLQI MKESYVYVGF FLNLPCEFVR ECLPRAHRKL  480
KLWNPQGKSW DVNYVYYSER CGGGLSGGWG KFSLDNNLEK FDVCVFELFL KDNIKVHIYR  540
VVPEITPFLP GPGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66980.1	2e-16	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG034120.2