PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG033340.13
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 309aa    MW: 33703.3 Da    PI: 5.1535
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG033340.13genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS181.75.2e-5673072303
               GRAS   2 velLlecAeavssgdlelaqalLarlsel..aspdg...dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevs 88 
                        ++lLl+ Aeav++gd + a a+ +rl  l   sp+     ++ Rla +f+++L++r+++      ++ ++s+ +    s++++a+++ +e+s
  TRIDC4AG033340.13   7 TDLLLTGAEAVEAGDPRFALAVFSRLDGLllGSPENaaaGSFDRLAYHFAQGLRSRISS------ASTSCSPPE-PLASDRMSAQQIIQELS 91 
                        689***********************998885554422379*****************9......333333333.247999*********** PP

               GRAS  89 PilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnv 180
                        P+ kf+h+taNqaIl+a++g+++vH++D++i++G+QWp+++  La    g  s+ +T++ + +       ++ ++rL++fA++l++pf+++ 
  TRIDC4AG033340.13  92 PFAKFAHFTANQAILDATKGDTHVHVVDLNIGEGIQWPSFMSDLARH--GGMSFHLTAITADADYTDGVHHASARRLSEFADSLNLPFQYSC 181
                        *********************************************84..6689********777788899999******************* PP

               GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevL.klvkslsPkvvvvveqeadh.nse......sFlerflealeyy 264
                        l  ++ e  +l+e++ + + +++ ++    +       +l s+ +++L  +vk l+Pk++vvve+e+ + ++e      sF++ f+eal+++
  TRIDC4AG033340.13 182 LCLHSDE--DLHEFSKNCKGSVIFSCDTTSMPY-----KLLSKLPALLpACVKLLQPKLMVVVEEELVRiGKEvslckaSFVDFFFEALHHF 266
                        8555444..458888888999999998855444.....45566778883579*************95554555666666************* PP

               GRAS 265 salfdsl.eaklpres.eerikvErellgreivnvvacega 303
                        +++f+sl +  ++ ++    + vEre++g++i++ v + g+
  TRIDC4AG033340.13 267 TTVFESLaSCFVGGNQgACLRLVEREMVGPRIQDFVGQYGS 307
                        *******555555555677899*************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    
MEENSLTDLL LTGAEAVEAG DPRFALAVFS RLDGLLLGSP ENAAAGSFDR LAYHFAQGLR  60
SRISSASTSC SPPEPLASDR MSAQQIIQEL SPFAKFAHFT ANQAILDATK GDTHVHVVDL  120
NIGEGIQWPS FMSDLARHGG MSFHLTAITA DADYTDGVHH ASARRLSEFA DSLNLPFQYS  180
CLCLHSDEDL HEFSKNCKGS VIFSCDTTSM PYKLLSKLPA LLPACVKLLQ PKLMVVVEEE  240
LVRIGKEVSL CKASFVDFFF EALHHFTTVF ESLASCFVGG NQGACLRLVE REMVGPRIQD  300
FVGQYGSMT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-28GRAS family protein