PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG033000.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 288aa    MW: 30423.2 Da    PI: 10.1359
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG033000.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.50.0001194216223
                       EETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                       +C+dC++ F   ++L+ H  t H
  TRIDC4AG033000.2 194 PCSDCDEFFAKAESLELHRATrH 216
                       6******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MDATAAGKKM GIGGEKKQQR KPGSSFWGAM ALKSRSQPGG AGESKNIKSE RKTTTTTTKR  60
SVSIGRSMTC PGSICGTKES AVLSRESCRN SHSGRNVSSS SRSLKAPDND ILSVPVVASG  120
AVVSASSSFN SETSVATTAT TVSSSSSSSS ALSSPLSSIV AGSRSFRKLS GCYYECHSAL  180
DPRTSLVGGA GMLPCSDCDE FFAKAESLEL HRATRHAVSE LGAEDTSRNV VEIIFQSSWL  240
VGKPRAAPIC RIERILKVYS SGRTVERFEQ YRERVKAIAA SSTDELAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.13e-37C2H2 family protein