PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG032020.7

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 769aa MW: 83611 Da PI: 6.707

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG032020.7	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00063	573	611	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a k s + Lek+v+++ Lq TRIDC4AG032020.7 573 RQLIQDRIKELREMVPNgA-----KQCSIDALLEKTVKHMLFLQ 611 67799**********66.....66888899****999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 769 aa Download sequence
MHYQFRAGIK TIAIIPVLPR GVLQLGSTGV VVENTSFVMH AKKLCSQLNQ RSSMAASASV 60 KSTSNQSRPL HGASNIQAAD NSFSQFPVMR EQYRRSDSAT ASSSKSLNAS LFEAAQQNGL 120 TGREHIVYGK PNDMFLQQAS YCDSRLGSNT LSAAISSDLV PSSLASVEQQ QMLMNTIGQL 180 EFGSGADLAR SALLKSLLYR NPFMHETSDM KLSHGRVGLS QGTTGHGSYG FLPGSAGVVS 240 TTLCTSSQVS EQGSHSSSGM LRQKQPPVSC NVPQSSEFTM KMVRQERSSE SALPVSSQSD 300 AQVSNCLNGI SQENLLSRSG HMQKDQNANR ANDTRVAVST QGVKNVDGCM LPAMPSETAH 360 SLLLQPTWDN DLFDIFGSEF HQLGHNVDAN LVSSCDAKSH SLDRDAAEPS ICLDSSSLFS 420 SLDNDFPCSG IFSLTDTDQL LDAVISNVNP SSKQSSDDNA SCKTALTDIP NISHFGLEEL 480 KQCDSSGIPS TVIKNESTQI VRQPYYFDKT EDGCLSQNNG AQKSQIRLWI ENGQNMKCES 540 ASASNSKGLD TQSKSNRKRS RPGESSKARP KDRQLIQDRI KELREMVPNG AKQCSIDALL 600 EKTVKHMLFL QSVTKHADKL KDSTESKILG SENGPVWKDY FEGGATWAFD VGSQSMTCPI 660 IVEDLDRPRQ MLVEMICEDR GIFLEIADFI KGLGLTILRG VMEARKSKIW ARFTVEANRD 720 VTRMEIFLSL VRLLEPNCDG SGAVENPNSV NMPLGLVRQP VIPATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 769 aa Download sequence

MHYQFRAGIK TIAIIPVLPR GVLQLGSTGV VVENTSFVMH AKKLCSQLNQ RSSMAASASV  60
KSTSNQSRPL HGASNIQAAD NSFSQFPVMR EQYRRSDSAT ASSSKSLNAS LFEAAQQNGL  120
TGREHIVYGK PNDMFLQQAS YCDSRLGSNT LSAAISSDLV PSSLASVEQQ QMLMNTIGQL  180
EFGSGADLAR SALLKSLLYR NPFMHETSDM KLSHGRVGLS QGTTGHGSYG FLPGSAGVVS  240
TTLCTSSQVS EQGSHSSSGM LRQKQPPVSC NVPQSSEFTM KMVRQERSSE SALPVSSQSD  300
AQVSNCLNGI SQENLLSRSG HMQKDQNANR ANDTRVAVST QGVKNVDGCM LPAMPSETAH  360
SLLLQPTWDN DLFDIFGSEF HQLGHNVDAN LVSSCDAKSH SLDRDAAEPS ICLDSSSLFS  420
SLDNDFPCSG IFSLTDTDQL LDAVISNVNP SSKQSSDDNA SCKTALTDIP NISHFGLEEL  480
KQCDSSGIPS TVIKNESTQI VRQPYYFDKT EDGCLSQNNG AQKSQIRLWI ENGQNMKCES  540
ASASNSKGLD TQSKSNRKRS RPGESSKARP KDRQLIQDRI KELREMVPNG AKQCSIDALL  600
EKTVKHMLFL QSVTKHADKL KDSTESKILG SENGPVWKDY FEGGATWAFD VGSQSMTCPI  660
IVEDLDRPRQ MLVEMICEDR GIFLEIADFI KGLGLTILRG VMEARKSKIW ARFTVEANRD  720
VTRMEIFLSL VRLLEPNCDG SGAVENPNSV NMPLGLVRQP VIPATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG032020.7