PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG032020.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 779aa MW: 84733.4 Da PI: 6.4552

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG032020.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00063	583	621	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a k s + Lek+v+++ Lq TRIDC4AG032020.6 583 RQLIQDRIKELREMVPNgA-----KQCSIDALLEKTVKHMLFLQ 621 67799**********66.....66888899****999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
MVNYLTLACI WNSIMFLVLQ TIAIIPVLPR GVLQLGSTGV VVENTSFVMH AKKLCSQLNQ 60 RSSMAASASV KSTSNQSRPL HGASNIQAAD NSFSQFPVMR EQYRRSDSAT ASSSKSLNAS 120 LFEAAQQNGL TGREHIVYGK PNDMFLQQAS YCDSRLGSNT LSAAISSDLV PSSLASVEQQ 180 QMLMNTIGQL EFGSGADLAR SALLKSLLYR NPFMHETSDM KLSHGRVGLS QGTTGHGSYG 240 FLPGSAGVVS TTLCTSSQVS EQGSHSSSGM LRQKQPPVSC NVPQSSEFTM KMVRQERSSE 300 SALPVSSQSD AQVSNCLNGI SQENLLSRSG HMQKDQNANR ANDTRVAVST QGVKNVDGCM 360 LPAMPSETAH SLLLQPTWDN DLFDIFGSEF HQLGHNVDAN LVSSCDAKSH SLDRDAAEPS 420 ICLDSSSLFS SLDNDFPCSG IFSLTDTDQL LDAVISNVNP SSKQSSDDNA SCKTALTDIP 480 NISHFGLEEL KQCDSSGIPS TVIKNESTQI VRQPYYFDKT EDGCLSQNNG AQKSQIRLWI 540 ENGQNMKCES ASASNSKGLD TQSKSNRKRS RPGESSKARP KDRQLIQDRI KELREMVPNG 600 AKQCSIDALL EKTVKHMLFL QSVTKHADKL KDSTESKILG SENGPVWKDY FEGGATWAFD 660 VGSQSMTCPI IVEDLDRPRQ MLVEMICEDR GIFLEIADFI KGLGLTILRG VMEARKSKIW 720 ARFTVEANRD VTRMEIFLSL VRLLEPNCDG SGAVENPNSV NMPLGLVRQP VIPATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

MVNYLTLACI WNSIMFLVLQ TIAIIPVLPR GVLQLGSTGV VVENTSFVMH AKKLCSQLNQ  60
RSSMAASASV KSTSNQSRPL HGASNIQAAD NSFSQFPVMR EQYRRSDSAT ASSSKSLNAS  120
LFEAAQQNGL TGREHIVYGK PNDMFLQQAS YCDSRLGSNT LSAAISSDLV PSSLASVEQQ  180
QMLMNTIGQL EFGSGADLAR SALLKSLLYR NPFMHETSDM KLSHGRVGLS QGTTGHGSYG  240
FLPGSAGVVS TTLCTSSQVS EQGSHSSSGM LRQKQPPVSC NVPQSSEFTM KMVRQERSSE  300
SALPVSSQSD AQVSNCLNGI SQENLLSRSG HMQKDQNANR ANDTRVAVST QGVKNVDGCM  360
LPAMPSETAH SLLLQPTWDN DLFDIFGSEF HQLGHNVDAN LVSSCDAKSH SLDRDAAEPS  420
ICLDSSSLFS SLDNDFPCSG IFSLTDTDQL LDAVISNVNP SSKQSSDDNA SCKTALTDIP  480
NISHFGLEEL KQCDSSGIPS TVIKNESTQI VRQPYYFDKT EDGCLSQNNG AQKSQIRLWI  540
ENGQNMKCES ASASNSKGLD TQSKSNRKRS RPGESSKARP KDRQLIQDRI KELREMVPNG  600
AKQCSIDALL EKTVKHMLFL QSVTKHADKL KDSTESKILG SENGPVWKDY FEGGATWAFD  660
VGSQSMTCPI IVEDLDRPRQ MLVEMICEDR GIFLEIADFI KGLGLTILRG VMEARKSKIW  720
ARFTVEANRD VTRMEIFLSL VRLLEPNCDG SGAVENPNSV NMPLGLVRQP VIPATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	1e-51	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG032020.6