PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC4AG032020.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 867aa MW: 93995.7 Da PI: 6.1586

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG032020.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.3	0.00067	672	709	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a K s + Lek+v+++ Lq TRIDC4AG032020.4 672 RQLIQDRIKELREMVPNgA------KCSIDALLEKTVKHMLFLQ 709 67799**********66......999999******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 867 aa Download sequence
MAVGEALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG 60 CSAAVDSICS LVRKDMAEQV HVVGEGTIGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY 120 QFRAGIKTIA IIPVLPRGVL QLGSTGVVVE NTSFVMHAKK LCSQLNQRSS MAASASVKNN 180 SFSQFPVMRE QYRRSDSATA SSSKSLNASL FEAAQQNGLT GREHIVYGKP NDMFLQQASY 240 CDSRLGSNTL SAAISSDLVP SSLASVEQQQ MLMNTIGQLE FGSGADLARS ALLKSLLYRN 300 PFMHETSDMK LSHGRVGLSQ GTTGHGSYGF LPGSAGVVST TLCTSSQVSE QGSHSSSGML 360 RQKQPPVSCN VPQSSEFTMK MVRQERSSES ALPVSSQSDA QVSNCLNGIS QENLLSRSGH 420 MQKDQNANRA NDTRVAVSTQ GVKNVDGCML PAMPSETAHS LLLQPTWDND LFDIFGSEFH 480 QLGHNVDANL VSSCDAKSHS LDRDAAEPSI CLDSSSLFSS LDNDFPCSGI FSLTDTDQLL 540 DAVISNVNPS SKQSSDDNAS CKTALTDIPN ISHFGLEELK QCDSSGIPST VIKNESTQIV 600 RQPYYFDKTE DGCLSQNNGA QKSQIRLWIE NGQNMKCESA SASNSKGLDT QSKSNRKRSR 660 PGESSKARPK DRQLIQDRIK ELREMVPNGA KCSIDALLEK TVKHMLFLQS VTKHADKLKD 720 STESKILGSE NGPVWKDYFE GGATWAFDVG SQSMTCPIIV EDLDRPRQML VEMICEDRGI 780 FLEIADFIKG LGLTILRGVM EARKSKIWAR FTVEANRDVT RMEIFLSLVR LLEPNCDGSG 840 AVENPNSVNM PLGLVRQPVI PATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 867 aa Download sequence

MAVGEALRRL CEEIGWSYAV FWKAIGAADP VHLVWEDGYC GHTPCPAGSE ASQARAAELG  60
CSAAVDSICS LVRKDMAEQV HVVGEGTIGR VAFTGSHQWI IHGTADDHGL SSEVASEMHY  120
QFRAGIKTIA IIPVLPRGVL QLGSTGVVVE NTSFVMHAKK LCSQLNQRSS MAASASVKNN  180
SFSQFPVMRE QYRRSDSATA SSSKSLNASL FEAAQQNGLT GREHIVYGKP NDMFLQQASY  240
CDSRLGSNTL SAAISSDLVP SSLASVEQQQ MLMNTIGQLE FGSGADLARS ALLKSLLYRN  300
PFMHETSDMK LSHGRVGLSQ GTTGHGSYGF LPGSAGVVST TLCTSSQVSE QGSHSSSGML  360
RQKQPPVSCN VPQSSEFTMK MVRQERSSES ALPVSSQSDA QVSNCLNGIS QENLLSRSGH  420
MQKDQNANRA NDTRVAVSTQ GVKNVDGCML PAMPSETAHS LLLQPTWDND LFDIFGSEFH  480
QLGHNVDANL VSSCDAKSHS LDRDAAEPSI CLDSSSLFSS LDNDFPCSGI FSLTDTDQLL  540
DAVISNVNPS SKQSSDDNAS CKTALTDIPN ISHFGLEELK QCDSSGIPST VIKNESTQIV  600
RQPYYFDKTE DGCLSQNNGA QKSQIRLWIE NGQNMKCESA SASNSKGLDT QSKSNRKRSR  660
PGESSKARPK DRQLIQDRIK ELREMVPNGA KCSIDALLEK TVKHMLFLQS VTKHADKLKD  720
STESKILGSE NGPVWKDYFE GGATWAFDVG SQSMTCPIIV EDLDRPRQML VEMICEDRGI  780
FLEIADFIKG LGLTILRGVM EARKSKIWAR FTVEANRDVT RMEIFLSLVR LLEPNCDGSG  840
AVENPNSVNM PLGLVRQPVI PATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	9e-53	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG032020.4