PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC4AG032020.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 739aa MW: 80392.1 Da PI: 6.352

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG032020.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.5	0.00055	544	581	13	55
HHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLre++P+ a K s + Lek+v+++ Lq TRIDC4AG032020.11 544 RQLIQDRIKELREMVPNgA------KCSIDALLEKTVKHMLFLQ 581 67799**********66......999999******99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 739 aa Download sequence
QVVENTSFVM HAKKLCSQLN QRSSMAASAS VKSTSNQSRP LHGASNIQAA DNSFSQFPVM 60 REQYRRSDSA TASSSKSLNA SLFEAAQQNG LTGREHIVYG KPNDMFLQQA SYCDSRLGSN 120 TLSAAISSDL VPSSLASVEQ QQMLMNTIGQ LEFGSGADLA RSALLKSLLY RNPFMHETSD 180 MKLSHGRVGL SQGTTGHGSY GFLPGSAGVV STTLCTSSQV SEQGSHSSSG MLRQKQPPVS 240 CNVPQSSEFT MKMVRQERSS ESALPVSSQS DAQVSNCLNG ISQENLLSRS GHMQKDQNAN 300 RANDTRVAVS TQGVKNVDGC MLPAMPSETA HSLLLQPTWD NDLFDIFGSE FHQLGHNVDA 360 NLVSSCDAKS HSLDRDAAEP SICLDSSSLF SSLDNDFPCS GIFSLTDTDQ LLDAVISNVN 420 PSSKQSSDDN ASCKTALTDI PNISHFGLEE LKQCDSSGIP STVIKNESTQ IVRQPYYFDK 480 TEDGCLSQNN GAQKSQIRLW IENGQNMKCE SASASNSKGL DTQSKSNRKR SRPGESSKAR 540 PKDRQLIQDR IKELREMVPN GAKCSIDALL EKTVKHMLFL QSVTKHADKL KDSTESKILG 600 SENGPVWKDY FEGGATWAFD VGSQSMTCPI IVEDLDRPRQ MLVEMICEDR GIFLEIADFI 660 KGLGLTILRG VMEARKSKIW ARFTVEANRD VTRMEIFLSL VRLLEPNCDG SGAVENPNSV 720 NMPLGLVRQP VIPATGGIQ

Sequence ? help Back to Top

Protein Sequence Length: 739 aa Download sequence

QVVENTSFVM HAKKLCSQLN QRSSMAASAS VKSTSNQSRP LHGASNIQAA DNSFSQFPVM  60
REQYRRSDSA TASSSKSLNA SLFEAAQQNG LTGREHIVYG KPNDMFLQQA SYCDSRLGSN  120
TLSAAISSDL VPSSLASVEQ QQMLMNTIGQ LEFGSGADLA RSALLKSLLY RNPFMHETSD  180
MKLSHGRVGL SQGTTGHGSY GFLPGSAGVV STTLCTSSQV SEQGSHSSSG MLRQKQPPVS  240
CNVPQSSEFT MKMVRQERSS ESALPVSSQS DAQVSNCLNG ISQENLLSRS GHMQKDQNAN  300
RANDTRVAVS TQGVKNVDGC MLPAMPSETA HSLLLQPTWD NDLFDIFGSE FHQLGHNVDA  360
NLVSSCDAKS HSLDRDAAEP SICLDSSSLF SSLDNDFPCS GIFSLTDTDQ LLDAVISNVN  420
PSSKQSSDDN ASCKTALTDI PNISHFGLEE LKQCDSSGIP STVIKNESTQ IVRQPYYFDK  480
TEDGCLSQNN GAQKSQIRLW IENGQNMKCE SASASNSKGL DTQSKSNRKR SRPGESSKAR  540
PKDRQLIQDR IKELREMVPN GAKCSIDALL EKTVKHMLFL QSVTKHADKL KDSTESKILG  600
SENGPVWKDY FEGGATWAFD VGSQSMTCPI IVEDLDRPRQ MLVEMICEDR GIFLEIADFI  660
KGLGLTILRG VMEARKSKIW ARFTVEANRD VTRMEIFLSL VRLLEPNCDG SGAVENPNSV  720
NMPLGLVRQP VIPATGGIQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	2e-53	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG032020.11