PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG030480.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 680aa    MW: 72524 Da    PI: 6.3313
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG030480.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.14.9e-1263096732374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPil 91 
                        +lLl+cAe v+s+dl +aq++L ++ ela+p g+++qR+aayf+eA++arl++s+ +ly+ lp  +++  +    s+++aa+++f+ +sP++
  TRIDC4AG030480.4 309 LTLLLQCAESVNSDDLDEAQRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPNASSPAASrlvNSRVAAAFQVFNGISPFV 401
                       579************************************************************77666655568788899999********** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kfsh+taNqaI ea+e+e+rvHi+D+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s e+le+tg+rL++fA++lg+pfef + va 
  TRIDC4AG030480.4 402 KFSHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMEALEATGKRLSDFAHTLGLPFEFYP-VAG 489
                       **********************************************************....***************************.799 PP

              GRAS 185 rledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                       +  +l++e+L v++  +Ea+aV++ +  h+l+d +++ ++    +L+l+++l Pkvv++veq+++h s+sFl+rf+ea++yysalfdsl+a++
  TRIDC4AG030480.4 490 KAGNLDPEKLGVDTrrREAVAVHWLH--HSLYDVTGNDSN----TLNLIQRLAPKVVTMVEQDLSH-SGSFLARFVEAIHYYSALFDSLDASY 575
                       **********999888*********9..999988888888....**********************.899*********************** PP

              GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                       +++s+er++vE++ll+rei+nv+a  g +r+ + + +++Wre+l ++GF++++l  +aa+qa+lll +++sdgy++ ee+g+l lgWkd  L+
  TRIDC4AG030480.4 576 SEDSSERHVVEQQLLAREIRNVLAVGGPARTGDIK-FGNWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGTLKLGWKDLCLL 667
                       *****************************999987.********************************************************* PP

              GRAS 369 svSaWr 374
                       ++SaWr
  TRIDC4AG030480.4 668 TASAWR 673
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 680 aa     Download sequence    
XXXXXXXXFP SSSSSAPNHS SYSHAHAAAS ASHSALLPPL PSASPSDLFL YLDQLDHQEG  60
AATMVRKRPA PDVDLPPPRR HVTGDLSDVT AATGGAAPPQ QLPSAVAGSA QLPALPMQLP  120
AFGGHLQAPV PAMDVVVAPQ VATEVNVNND STAWVDGIIR DIIGSSGAAV SVAQLIHNVR  180
EIIHPCNPGL ASLLELRLRS LLASDLVQHP PPPPPLPPHH PPSLLPGAGG NTILSAPPVP  240
ALPPPPPPDK RRREEEQQNP PPQSPKPPPS AEETAAAAAA AAAAASAALK ERKEEQRRRQ  300
RDEEGLHLLT LLLQCAESVN SDDLDEAQRA LLEIAELATP FGTSTQRVAA YFAEAMSARL  360
VSSCLGLYAP LPNASSPAAS RLVNSRVAAA FQVFNGISPF VKFSHFTANQ AIQEAFERED  420
RVHIVDLDIM QGLQWPGLFH ILASRPGGPP RVRLTGLGAS MEALEATGKR LSDFAHTLGL  480
PFEFYPVAGK AGNLDPEKLG VDTRRREAVA VHWLHHSLYD VTGNDSNTLN LIQRLAPKVV  540
TMVEQDLSHS GSFLARFVEA IHYYSALFDS LDASYSEDSS ERHVVEQQLL AREIRNVLAV  600
GGPARTGDIK FGNWREKLAQ SGFRAASLAG SAAAQASLLL GMFPSDGYTL VEENGTLKLG  660
WKDLCLLTAS AWRPFQALGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein