PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG030480.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 585aa    MW: 62837.3 Da    PI: 6.3115
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG030480.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS412.73.3e-1262145782374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn...sseelaalklfsevsPil 91 
                        +lLl+cAe v+s+dl +aq++L ++ ela+p g+++qR+aayf+eA++arl++s+ +ly+ lp  +++  +    s+++aa+++f+ +sP++
  TRIDC4AG030480.2 214 LTLLLQCAESVNSDDLDEAQRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPNASSPAASrlvNSRVAAAFQVFNGISPFV 306
                       579************************************************************77666655568788899999********** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       kfsh+taNqaI ea+e+e+rvHi+D+di+qGlQWp L++ LasRp+gpp++R+Tg+g+    s e+le+tg+rL++fA++lg+pfef + va 
  TRIDC4AG030480.2 307 KFSHFTANQAIQEAFEREDRVHIVDLDIMQGLQWPGLFHILASRPGGPPRVRLTGLGA----SMEALEATGKRLSDFAHTLGLPFEFYP-VAG 394
                       **********************************************************....***************************.799 PP

              GRAS 185 rledleleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                       +  +l++e+L v++  +Ea+aV++ +  h+l+d +++ ++    +L+l+++l Pkvv++veq+++h s+sFl+rf+ea++yysalfdsl+a++
  TRIDC4AG030480.2 395 KAGNLDPEKLGVDTrrREAVAVHWLH--HSLYDVTGNDSN----TLNLIQRLAPKVVTMVEQDLSH-SGSFLARFVEAIHYYSALFDSLDASY 480
                       **********999888*********9..999988888888....**********************.899*********************** PP

              GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLv 368
                       +++s+er++vE++ll+rei+nv+a  g +r+ + + +++Wre+l ++GF++++l  +aa+qa+lll +++sdgy++ ee+g+l lgWkd  L+
  TRIDC4AG030480.2 481 SEDSSERHVVEQQLLAREIRNVLAVGGPARTGDIK-FGNWREKLAQSGFRAASLAGSAAAQASLLLGMFPSDGYTLVEENGTLKLGWKDLCLL 572
                       *****************************999987.********************************************************* PP

              GRAS 369 svSaWr 374
                       ++SaWr
  TRIDC4AG030480.2 573 TASAWR 578
                       *****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 585 aa     Download sequence    
MVRKRPAPDV DLPPPRRHVT GDLSDVTAAT GGAAPPQQLP SAVAGSAQLP ALPMQLPAFG  60
GHLQAPVPAM DVVVAPQVAT EVNVNNDSTA WVDGIIRDII GSSGAAVSVA QLIHNVREII  120
HPCNPGLASL LELRLRSLLA SDLVQHPPPP PPLPPRRREE EQQNPPPQSP KPPPSAEETA  180
AAAAAAAAAA SAALKERKEE QRRRQRDEEG LHLLTLLLQC AESVNSDDLD EAQRALLEIA  240
ELATPFGTST QRVAAYFAEA MSARLVSSCL GLYAPLPNAS SPAASRLVNS RVAAAFQVFN  300
GISPFVKFSH FTANQAIQEA FEREDRVHIV DLDIMQGLQW PGLFHILASR PGGPPRVRLT  360
GLGASMEALE ATGKRLSDFA HTLGLPFEFY PVAGKAGNLD PEKLGVDTRR REAVAVHWLH  420
HSLYDVTGND SNTLNLIQRL APKVVTMVEQ DLSHSGSFLA RFVEAIHYYS ALFDSLDASY  480
SEDSSERHVV EQQLLAREIR NVLAVGGPAR TGDIKFGNWR EKLAQSGFRA ASLAGSAAAQ  540
ASLLLGMFPS DGYTLVEENG TLKLGWKDLC LLTASAWRPF QALGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.10.0GRAS family protein