PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG030290.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 238aa    MW: 26842.9 Da    PI: 11.8855
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG030290.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.5e-171461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd +lv +++++G+g+W++++   g+ R+ k+c++rw +yl
  TRIDC4AG030290.7 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPVSTGLMRCSKSCRLRWTNYL 61
                      79********************************************97 PP
2Myb_DNA-binding45.22.1e-1467112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T  E+  +v++  +lG++ W++Ia++++ +Rt++++k++w+++l
  TRIDC4AG030290.7  67 RGNFTSHEEGVIVHLQSLLGNR-WAAIASYLP-RRTDNDIKNYWNTHL 112
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MGRPPCCDKL GVKKGPWTPE EDIILVSYIQ EHGPGNWRSV PVSTGLMRCS KSCRLRWTNY  60
LRTGIKRGNF TSHEEGVIVH LQSLLGNRWA AIASYLPRRT DNDIKNYWNT HLKKKLRKQQ  120
AMGAIFAPPA SSSPGCPRGL LLVVLRFERG QHIQAARRLH EELPAAAAAA QQLRRRRRQA  180
SAALGQYVRH RQRRAELHRQ RAAAGVDGGT RRVRVRRRDQ AEAAASGATV LDREVVVR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1211219RRVRVRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08810.15e-80MYB family protein