PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028410.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 304aa    MW: 34905.3 Da    PI: 8.708
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028410.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS257.83.9e-79329881373
              GRAS  81 lklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAee 171
                       ++l   ++  +k++ l a ++I +av+g +++Hi+ ++i+ G+QWp Ll+ La+R++gpp++RiTg++ p++g   ++ +ee g+rL + A++
  TRIDC4AG028410.3   3 FHLHMAACCSMKVGLLFAINTICKAVAGRRKLHIVHYGITTGFQWPDLLRLLANREGGPPQVRITGINTPRPGlrPAQIMEEAGDRLGNCAKQ 95 
                       56677889999*************************************************************9*99***************** PP

              GRAS 172 lgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerfleale 262
                       +gvpfef++ va++ ed++ e+L+++p+E+l+Vn++++  +l+des++ +   +rd vL+ + +++P v+v +  +  ++++ F++rf +al+
  TRIDC4AG028410.3  96 FGVPFEFRA-VASKPEDVRAEDLHIDPDEVLVVNSMYEFRTLMDESLTFDMvsPRDMVLNNISKMRPAVFVQSLVNGPYSAAFFMTRFRHALY 187
                       *********.7**********************************98765555**************************************** PP

              GRAS 263 yysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveees 355
                       y++alfd +e+++pr++++r  vEr +l+r++ n++acega+r+er +++++W++r e+aG++++pl+ +++   k  ++  + + +++ e++
  TRIDC4AG028410.3 188 YFTALFDVMENTVPRDNDQRLLVERDMLARSAINMIACEGADRVERPQNYKEWQARNERAGLRQLPLDPDVVLMLKDQVKSRYHKHFMISEDH 280
                       ***********************************************************************************999******* PP

              GRAS 356 gslvlgWkdrpLvsvSaW 373
                        +l++gWk+r L++ S W
  TRIDC4AG028410.3 281 RWLLQGWKGRVLYAHSTW 298
                       ****************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
KAFHLHMAAC CSMKVGLLFA INTICKAVAG RRKLHIVHYG ITTGFQWPDL LRLLANREGG  60
PPQVRITGIN TPRPGLRPAQ IMEEAGDRLG NCAKQFGVPF EFRAVASKPE DVRAEDLHID  120
PDEVLVVNSM YEFRTLMDES LTFDMVSPRD MVLNNISKMR PAVFVQSLVN GPYSAAFFMT  180
RFRHALYYFT ALFDVMENTV PRDNDQRLLV ERDMLARSAI NMIACEGADR VERPQNYKEW  240
QARNERAGLR QLPLDPDVVL MLKDQVKSRY HKHFMISEDH RWLLQGWKGR VLYAHSTWAS  300
QVID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.12e-96GRAS family protein