PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028410.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 617aa    MW: 69488.3 Da    PI: 6.8281
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028410.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS324.32.4e-992376082373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cAeavss+d + a++lL+r++ ++sp+gd+ qRla+yf+++L+arla+++s+ly+al  ++t    ++  ++a++l   ++  +k++
  TRIDC4AG028410.2 237 ETLLIRCAEAVSSNDVHGASKLLERIKWHSSPTGDAKQRLAHYFAQGLEARLAGTGSRLYRALMEKHTL---TVGLIKAFHLHMAACCSMKVG 326
                       789**********************************************************99988887...8999***************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                        l a ++I +av+g +++Hi+ ++i+ G+QWp Ll+ La+R++gpp++RiTg++ p++g   ++ +ee g+rL + A+++gvpfef++ va++
  TRIDC4AG028410.2 327 LLFAINTICKAVAGRRKLHIVHYGITTGFQWPDLLRLLANREGGPPQVRITGINTPRPGlrPAQIMEEAGDRLGNCAKQFGVPFEFRA-VASK 418
                       **********************************************************9*99**************************.7*** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        ed++ e+L+++p+E+l+Vn++++  +l+des++ +   +rd vL+ + +++P v+v +  +  ++++ F++rf +al+y++alfd +e+++p
  TRIDC4AG028410.2 419 PEDVRAEDLHIDPDEVLVVNSMYEFRTLMDESLTFDMvsPRDMVLNNISKMRPAVFVQSLVNGPYSAAFFMTRFRHALYYFTALFDVMENTVP 511
                       *******************************98765555****************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r++++r  vEr +l+r++ n++acega+r+er +++++W++r e+aG++++pl+ +++   k  ++  + + +++ e++ +l++gWk+r L++
  TRIDC4AG028410.2 512 RDNDQRLLVERDMLARSAINMIACEGADRVERPQNYKEWQARNERAGLRQLPLDPDVVLMLKDQVKSRYHKHFMISEDHRWLLQGWKGRVLYA 604
                       *********************************************************************999********************* PP

              GRAS 370 vSaW 373
                        S W
  TRIDC4AG028410.2 605 HSTW 608
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 617 aa     Download sequence    
MTHDDSQQPQ NDLALEYISR MLTEEDIVDK FFYQYPDHPE LLQAEQPFAE ILANTSSDAH  60
ESFASSTSIL MPSQGNGTDF MVSRCQVQYP AFFLNGTGIA EASGLVFPIP SESSTRTDML  120
SSMAFFKGME EANRFLPADN VMVAGRGRKK RPGMDGEVEA GLGRSSKQIT VLPRCVQEEE  180
EATALEMLDR LVLNGYDAHP GEMQEVVRVT LEDKENKSAI GRRGRRGARH TVVTDLETLL  240
IRCAEAVSSN DVHGASKLLE RIKWHSSPTG DAKQRLAHYF AQGLEARLAG TGSRLYRALM  300
EKHTLTVGLI KAFHLHMAAC CSMKVGLLFA INTICKAVAG RRKLHIVHYG ITTGFQWPDL  360
LRLLANREGG PPQVRITGIN TPRPGLRPAQ IMEEAGDRLG NCAKQFGVPF EFRAVASKPE  420
DVRAEDLHID PDEVLVVNSM YEFRTLMDES LTFDMVSPRD MVLNNISKMR PAVFVQSLVN  480
GPYSAAFFMT RFRHALYYFT ALFDVMENTV PRDNDQRLLV ERDMLARSAI NMIACEGADR  540
VERPQNYKEW QARNERAGLR QLPLDPDVVL MLKDQVKSRY HKHFMISEDH RWLLQGWKGR  600
VLYAHSTWAS QNFGGQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-128GRAS family protein