PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028370.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 498aa    MW: 56450.9 Da    PI: 8.8927
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028370.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS338.98.7e-1041214922373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+c++a+s+++ + a++lL+r++++++p+gd+ qRla+yf+eAL arla+ +sely++l +++ts   +++ l+a +l+  ++ + k++
  TRIDC4AG028370.5 121 HTLLLNCVQALSTDNRRTASELLKRIRQHSTPKGDAAQRLAHYFAEALDARLAGRGSELYQSLMARRTS---VADFLKANQLYMAACCCKKVA 210
                       679**************************************************************9999...********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++ aN++I +av g++r+Hi+D+++sqGlQWp Ll  La+R++gpp+++iTg++ p++g   +  +eetg+rL++fA+ +gvpf+f+  +a +
  TRIDC4AG028370.5 211 FIFANKTICNAVVGKSRLHIVDYGLSQGLQWPGLLCMLAAREGGPPEVKITGIDLPQPGfqGAYHIEETGRRLSNFARVFGVPFKFHG-IAAK 302
                       **********************************************************9989999***********************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        e++++e+L+++++E+l+V +  +   l+de++ l+   +rd+vL+ +++++P+v+++   + +++++ Fl+rf eal  ysa fd l+a++p
  TRIDC4AG028370.5 303 RETVQPEDLSIDRDEVLVVISLCHFRLLMDENLGLDTpsPRDQVLNNIRKMRPDVFIHGIMNGSYGATYFLTRFREALFNYSAQFDLLDATVP 395
                       9**********************99999999987665559***************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r++e r  +Er ++gr++ nv+aceg++r+er et+++W+ r ++aG++++pl+ +++  +   ++  + + + v+e++ +l+  Wk+r L++
  TRIDC4AG028370.5 396 RDNEGRLLLERDIFGRSALNVIACEGSDRVERPETYKQWQLRNHRAGLRQLPLNPDVVRLVLDKVKDNYHKDFVVDEDQRWLLHRWKGRVLYA 488
                       ******************************************************************999888********************* PP

              GRAS 370 vSaW 373
                       +S W
  TRIDC4AG028370.5 489 LSTW 492
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 498 aa     Download sequence    
MLNLAFLKGM EEARKFLPPN SSLPAMKVDQ VVAGVHAGAG LKKKRDTLEP DMGRASKLMM  60
PEQEEDGARE LFDEMMFQEH EICMKGVQQL RVAVDSEPGK NRRKKGRPRR DSSDSEMVDL  120
HTLLLNCVQA LSTDNRRTAS ELLKRIRQHS TPKGDAAQRL AHYFAEALDA RLAGRGSELY  180
QSLMARRTSV ADFLKANQLY MAACCCKKVA FIFANKTICN AVVGKSRLHI VDYGLSQGLQ  240
WPGLLCMLAA REGGPPEVKI TGIDLPQPGF QGAYHIEETG RRLSNFARVF GVPFKFHGIA  300
AKRETVQPED LSIDRDEVLV VISLCHFRLL MDENLGLDTP SPRDQVLNNI RKMRPDVFIH  360
GIMNGSYGAT YFLTRFREAL FNYSAQFDLL DATVPRDNEG RLLLERDIFG RSALNVIACE  420
GSDRVERPET YKQWQLRNHR AGLRQLPLNP DVVRLVLDKV KDNYHKDFVV DEDQRWLLHR  480
WKGRVLYALS TWVADNAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-138GRAS family protein