PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028370.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 633aa    MW: 70983.9 Da    PI: 6.6786
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028370.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS337.91.8e-1032566272373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lLl+c++a+s+++ + a++lL+r++++++p+gd+ qRla+yf+eAL arla+ +sely++l +++ts   +++ l+a +l+  ++ + k++
  TRIDC4AG028370.2 256 HTLLLNCVQALSTDNRRTASELLKRIRQHSTPKGDAAQRLAHYFAEALDARLAGRGSELYQSLMARRTS---VADFLKANQLYMAACCCKKVA 345
                       679**************************************************************9999...********************* PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                       ++ aN++I +av g++r+Hi+D+++sqGlQWp Ll  La+R++gpp+++iTg++ p++g   +  +eetg+rL++fA+ +gvpf+f+  +a +
  TRIDC4AG028370.2 346 FIFANKTICNAVVGKSRLHIVDYGLSQGLQWPGLLCMLAAREGGPPEVKITGIDLPQPGfqGAYHIEETGRRLSNFARVFGVPFKFHG-IAAK 437
                       **********************************************************9989999***********************.6999 PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        e++++e+L+++++E+l+V +  +   l+de++ l+   +rd+vL+ +++++P+v+++   + +++++ Fl+rf eal  ysa fd l+a++p
  TRIDC4AG028370.2 438 RETVQPEDLSIDRDEVLVVISLCHFRLLMDENLGLDTpsPRDQVLNNIRKMRPDVFIHGIMNGSYGATYFLTRFREALFNYSAQFDLLDATVP 530
                       9**********************99999999987665559***************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       r++e r  +Er ++gr++ nv+aceg++r+er et+++W+ r ++aG++++pl+ +++  +   ++  + + + v+e++ +l+  Wk+r L++
  TRIDC4AG028370.2 531 RDNEGRLLLERDIFGRSALNVIACEGSDRVERPETYKQWQLRNHRAGLRQLPLNPDVVRLVLDKVKDNYHKDFVVDEDQRWLLHRWKGRVLYA 623
                       ******************************************************************999888********************* PP

              GRAS 370 vSaW 373
                       +S W
  TRIDC4AG028370.2 624 LSTW 627
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 633 aa     Download sequence    
RAMAATPEEF LGQQSFLSRL EPPSPSLFLG LPPTPRGVED GDSSFDDMAL PYISRLLEED  60
MEDHFFYLYP NHPALLRAQL PFAQILVDVA DSASGSTSAL SPSFSTSTFD ATASTTPSAT  120
SPYDAANYLL PGDQDMLNLA FLKGMEEARK FLPPNSSLPA MKVDQVVAGV HAGAGLKKKR  180
DTLEPDMGRA SKLMMPEQEE DGARELFDEM MFQEHEICMK GVQQLRVAVD SEPGKNRRKK  240
GRPRRDSSDS EMVDLHTLLL NCVQALSTDN RRTASELLKR IRQHSTPKGD AAQRLAHYFA  300
EALDARLAGR GSELYQSLMA RRTSVADFLK ANQLYMAACC CKKVAFIFAN KTICNAVVGK  360
SRLHIVDYGL SQGLQWPGLL CMLAAREGGP PEVKITGIDL PQPGFQGAYH IEETGRRLSN  420
FARVFGVPFK FHGIAAKRET VQPEDLSIDR DEVLVVISLC HFRLLMDENL GLDTPSPRDQ  480
VLNNIRKMRP DVFIHGIMNG SYGATYFLTR FREALFNYSA QFDLLDATVP RDNEGRLLLE  540
RDIFGRSALN VIACEGSDRV ERPETYKQWQ LRNHRAGLRQ LPLNPDVVRL VLDKVKDNYH  600
KDFVVDEDQR WLLHRWKGRV LYALSTWVAD NAT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-135GRAS family protein