PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028340.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 499aa    MW: 55937.7 Da    PI: 6.8349
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028340.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS291.32.6e-891594861325
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd++  ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts   + e l a+kl+  +s + k+
  TRIDC4AG028340.6 159 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYRSLVAKSTS---VGEFLRAYKLYMAASSFRKV 248
                       5789***************************************************************999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++   + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g   + ++eetg+rL+k A+e+gvpf+++  +  
  TRIDC4AG028340.6 249 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPDLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFRYHG-IPA 340
                       ***********************************************************999***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +le+++ e+L+++p+E+l+V ++    +l+desv ++      +rd vL  +++++P+v++ +  +  ++++ F++rf eal +ysa fd+l+
  TRIDC4AG028340.6 341 KLETVHAEDLNIDPNEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLTNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 433
                       ******************************99887665555669************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325
                       a++pr++++r  +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG++
  TRIDC4AG028340.6 434 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLR 486
                       ***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 499 aa     Download sequence    
GTPASAFFFN GQTDGDMDML NMAFRKGMEE ANKFLPTNNT LDAISNRPAL RDLTCDQLKK  60
EEADRLRMLM FSNGRGRKNR HGVEDLEAEA GRRSKLMMPE QEESGVGEMV EEIMLHGHDI  120
IMKGIEDLQI AMGTEAEKNH RKGTGKAARG RRGATEVDLR TMLIHCAQAV ATGDHRGSNE  180
LLRQIKQHSS PKGDATQRLA YCFAEGLEAR LAGTGSHVYR SLVAKSTSVG EFLRAYKLYM  240
AASSFRKVNF IFVGKIIMDA MVGKSRLHIV DYNVEYGFQW PDLLQMLAER EGGPPEVRIT  300
GIDVPQPGFR PAFQIEETGR RLSKCAQEFG VPFRYHGIPA KLETVHAEDL NIDPNEVLIV  360
TSQCGFSNLM DESVIMDRQD IPSPRDMVLT NIRNMRPDVF IDCVVNGTYS APFFVTRFRE  420
ALFTYSAQFD MLDATIPRDN DDRLLIERDI FGPCALNVIA CEGADRVDRP ETYKQWQVRG  480
HRAGLRGGKG GYSMPCRHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-119GRAS family protein