PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG028340.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 767aa    MW: 84791.6 Da    PI: 6.158
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG028340.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS331.22e-1013857601373
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++ L++cA+av++gd++  ++lL ++++++sp+gd++qRla +f+e+L+arla+++s++y++l +++ts   + e l a+kl+  +s + k+
  TRIDC4AG028340.4 385 LRTMLIHCAQAVATGDHRGSNELLRQIKQHSSPKGDATQRLAYCFAEGLEARLAGTGSHVYRSLVAKSTS---VGEFLRAYKLYMAASSFRKV 474
                       5789***************************************************************999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        ++   + I++a+ g++r+Hi+D+++++G+QWp Llq La+R++gpp++RiTg++ p++g   + ++eetg+rL+k A+e+gvpf+++  +  
  TRIDC4AG028340.4 475 NFIFVGKIIMDAMVGKSRLHIVDYNVEYGFQWPDLLQMLAEREGGPPEVRITGIDVPQPGfrPAFQIEETGRRLSKCAQEFGVPFRYHG-IPA 566
                       ***********************************************************999***************************.799 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsles.....erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsle 272
                       +le+++ e+L+++p+E+l+V ++    +l+desv ++      +rd vL  +++++P+v++ +  +  ++++ F++rf eal +ysa fd+l+
  TRIDC4AG028340.4 567 KLETVHAEDLNIDPNEVLIVTSQCGFSNLMDESVIMDRqdipsPRDMVLTNIRNMRPDVFIDCVVNGTYSAPFFVTRFREALFTYSAQFDMLD 659
                       ******************************99887665555669************************************************* PP

              GRAS 273 aklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdr 365
                       a++pr++++r  +Er ++g+ + nv+acega+r+ r et+++W+ r ++aG+++vpls+ ++k +k  ++  + + + ++ ++ +l++gWk+r
  TRIDC4AG028340.4 660 ATIPRDNDDRLLIERDIFGPCALNVIACEGADRVDRPETYKQWQVRGHRAGLRQVPLSSAVVKLVKDKVKSLYHKDFLIDVDNRWLLQGWKGR 752
                       *************************************************************************888***************** PP

              GRAS 366 pLvsvSaW 373
                        L+++S W
  TRIDC4AG028340.4 753 VLYAMSTW 760
                       ******** PP
Sequence ? help Back to Top
Protein Sequence    Length: 767 aa     Download sequence    
MAATPDEFLR AGDAEPFSPS LFLDLPPTPS PPRAPASDDL DFISRMLMEE DIDDRFFYQY  60
PDHPAILSAQ HRFAQIISDS NTNPSTDDSA VASSTFSSDS ATARSASSCS DSATNTTWPY  120
ERIDLSQPLH SPPYIGLGFP VDGANNLLFS GVSTPTSGYF GHTPALSRGN SNHFVAPAGQ  180
NGRSTGIQSF ATFSNSSATK DAKTLSNNAT AKAAKPATQA ACRGGPGTPA SAFFFNGQTD  240
GDMDMLNMAF RKGMEEANKF LPTNNTLDAI SNRPALRDLT CDQLKKEEAD RLRMLMFSNG  300
RGRKNRHGVE DLEAEAGRRS KLMMPEQEES GVGEMVEEIM LHGHDIIMKG IEDLQIAMGT  360
EAEKNHRKGT GKAARGRRGA TEVDLRTMLI HCAQAVATGD HRGSNELLRQ IKQHSSPKGD  420
ATQRLAYCFA EGLEARLAGT GSHVYRSLVA KSTSVGEFLR AYKLYMAASS FRKVNFIFVG  480
KIIMDAMVGK SRLHIVDYNV EYGFQWPDLL QMLAEREGGP PEVRITGIDV PQPGFRPAFQ  540
IEETGRRLSK CAQEFGVPFR YHGIPAKLET VHAEDLNIDP NEVLIVTSQC GFSNLMDESV  600
IMDRQDIPSP RDMVLTNIRN MRPDVFIDCV VNGTYSAPFF VTRFREALFT YSAQFDMLDA  660
TIPRDNDDRL LIERDIFGPC ALNVIACEGA DRVDRPETYK QWQVRGHRAG LRQVPLSSAV  720
VKLVKDKVKS LYHKDFLIDV DNRWLLQGWK GRVLYAMSTW SADKEDA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-139GRAS family protein