PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC4AG027670.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 208aa MW: 22981.5 Da PI: 6.7933

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC4AG027670.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	34.5	4.6e-11	14	40	19	46
TTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 19 lGggtWktIartmgkgRtlkqcksrwqk 46 lG ++W++Ia++++ gRt++++k++w++ TRIDC4AG027670.3 14 LGQPRWSKIAQHLP-GRTDNEIKNYWRT 40 8999********.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
RRRAAPHPRP PLSLGQPRWS KIAQHLPGRT DNEIKNYWRT RVQKHAKQLN CDVGSATFKD 60 AMRYLWMPRL VERIHAAAGD PTIGDTSCAS GVRSMATTAA TATTYPENNS AASAVTTSRS 120 ASSGSFTSEL CGEEKNLHVH GSGEKTTSGG DWMQEADQEF WAMHMQIQPE DGGLFHVDHE 180 LSGWVQGFSD VGVSADNLWS LEDIWKMQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49620.1	8e-34	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC4AG027670.3