PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG027140.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 375aa    MW: 41716.1 Da    PI: 6.611
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG027140.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF66.82.1e-211053245
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                      + en+s rqvt+skRr gilKKA+ELS+LCd++  +++fs++g+
  TRIDC4AG027140.4 10 KLENTSGRQVTYSKRRSGILKKAKELSILCDIDLILLMFSPSGR 53
                      679**************************************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MGRVKLKIKK LENTSGRQVT YSKRRSGILK KAKELSILCD IDLILLMFSP SGRPTICVGD  60
KSPIDEVIAK YAQQTPQERA KRKLESLEAL KKTFKKLDHD VNIQDFLGSG GQTVEELSSH  120
LGALQCQMAD VQKRLSYWSD PEKVENIDHI RAMEQSLKES LNRIGIHKEN FAKQHLMGLQ  180
CAAAQFQNEM QLPLGLTGDP NPSLWFHSGG GSDGQPAMML PEDPSLLHQS YPGYFSMSKQ  240
STDTAGGEQQ HQQAAAVHQH QHQQPEFSQG DCLTSLHLGA QFPYQSAFDH ASLLNDRLFR  300
PDMELHVDNA AASAMDFVGG HYEMPRPGDE ASFQNWASAA CGATMYDHQQ QQPSAQLIVK  360
NMTESLTVSS LQQQL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18750.11e-73M-type_MADS family protein