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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC4AG024620.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | WRKY | ||||||||
Protein Properties | Length: 243aa MW: 26472.7 Da PI: 6.3988 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 95.9 | 2.7e-30 | 94 | 150 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 dDgynWrKYGqK vkg e+prsYY+Ct+a+Cpvkkkve+sa +++++i+Y+g+Hnh+ TRIDC4AG024620.5 94 DDGYNWRKYGQKAVKGGEYPRSYYKCTQASCPVKKKVEHSA-YGQITQIIYRGQHNHQ 150 8****************************************.9**************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MANFEMSHQQ ALAQVTAQAV HSQYTVGSQA DYSLPFSSAT TSALTSQFIN SSANVTSMKE 60 TATLPLHTVN DNLKSNEVSQ GFQTSALTVD KPADDGYNWR KYGQKAVKGG EYPRSYYKCT 120 QASCPVKKKV EHSAYGQITQ IIYRGQHNHQ RPPKRRSKDG GNLLNEDDFP ENRDALTRSE 180 PGSQDHSGKV EVSNDGITGP SVSKRRGGGD QSSGSSDTEE DNDEAGDDNG DAGIVNANKR 240 WFM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 151 | 156 | RPPKRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01080.1 | 2e-34 | WRKY family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC4AG024620.5 |