PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC4AG018040.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WOX
Protein Properties Length: 258aa    MW: 26938.2 Da    PI: 9.4775
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC4AG018040.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox48.11.9e-151979257
                      T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      r+R+t+++eq+ +Le+ F++   +p ++e  ++ k l     + +++V++WFqNrR + ++
  TRIDC4AG018040.4 19 RSRWTPKPEQILILESIFNSgMVNPPKDETVRIRKLLerfgAVGDANVFYWFQNRRSRSRR 79
                      89*****************99*************************************997 PP
2Wus_type_Homeobox107.48.8e-351881265
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                       +r+RWtP+peQi iLe++++sG+++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q
   TRIDC4AG018040.4 18 VRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 81
                       589***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
GSPEERRSSG GRGAGEPVRS RWTPKPEQIL ILESIFNSGM VNPPKDETVR IRKLLERFGA  60
VGDANVFYWF QNRRSRSRRR QRQMQAAAAA AATAAAASSA TSSSSSGSTG GSSLGPFAAH  120
VAGVSGAGVG YLQASCGTSS PLASGLMADV DSGGSDDLFA ISRQMGFVGS PAGSSSAAPN  180
TAVQQQYYSC QLPAAAITVF INGVPMEVPR GPIDLRAMFG QDVVLLHSTG TLLPVNDYGI  240
LIQSLQMGES YFLVSRQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17810.11e-32WOX family protein