PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC4AG018040.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | WOX | ||||||||
Protein Properties | Length: 254aa MW: 26026.2 Da PI: 8.6783 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 23.6 | 9.1e-08 | 14 | 40 | 35 | 57 |
HHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 35 kkl....gLterqVkvWFqNrRakekk 57 k l + +++V++WFqNrR + ++ TRIDC4AG018040.3 14 KLLerfgAVGDANVFYWFQNRRSRSRR 40 444555568899************997 PP | |||||||
2 | Wus_type_Homeobox | 62.1 | 1.2e-20 | 1 | 42 | 24 | 65 |
Wus_type_Homeobox 24 lrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +++P+k+e+ ri++ Le++G+++d+NVfyWFQNr++R+r++q TRIDC4AG018040.3 1 MVNPPKDETVRIRKLLERFGAVGDANVFYWFQNRRSRSRRRQ 42 78**************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 254 aa Download sequence |
MVNPPKDETV RIRKLLERFG AVGDANVFYW FQNRRSRSRR RQRQMQAAAA AAATAAAASS 60 ANSLPAASAT IGLPSGTGSV HPMAIGGGAS QYEQQATSSS SSGSTGGSSL GPFAAHVAGV 120 SGAGVGYLQA SCGTSSPLAS GLMADVDSGG SDDLFAISRQ MGFVGSPAGS SSAAPNTAVQ 180 QQYYSCQLPA AAITVFINGV PMEVPRGPID LRAMFGQDVV LLHSTGTLLP VNDYGILIQS 240 LQMGESYFLV SRQT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G03660.1 | 3e-23 | WOX family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC4AG018040.3 |